PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4uu4A_

Fold library id	PDB Header	Molecule	Title
c4uu4A_	PDB header: transport protein	Chain: A: PDB Molecule: periplasmic lipopolysaccharide transport protein lpth;	PDBTitle: crystal structure of lpth, the lpta homologous periplasmic2 component of the conserved lipopolysaccharide transport3 device from pseudomonas aeruginosa

Links to external resources
Added to library: Sat Mar 28 08:15:43 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P S D R E Q P I R V Q A D S A E L D D K Q G V A V Y R G D V V V T Q G S T K L T G N T V T L K Q D K N G E V V T S V G K P A Y Y E Q K P A P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
S T T T T T T
S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D K D V T K A Y G L T I Q Y F V T Q N R V V L I D Q A K V I Q E G N T F E G E K I V Y D T Q R Q I V N A G R A T G S Q V T S P R P R I D M V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T T T T S S S
T T S
S S
S S

. . .

Sequence I Q P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	S	D	R	E	Q	P	I	R	V	Q	A	D	S	A	E	L	D	D	K	Q	G	V	A	V	Y	R	G	D	V	V	V	T	Q	G	S	T	K	L	T	G	N	T	V	T	L	K	Q	D	K	N	G	E	V	V	T	S	V	G	K	P	A	Y	Y	E	Q	K	P	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S							S						T	T	T	T													T	T														S																		S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	K	D	V	T	K	A	Y	G	L	T	I	Q	Y	F	V	T	Q	N	R	V	V	L	I	D	Q	A	K	V	I	Q	E	G	N	T	F	E	G	E	K	I	V	Y	D	T	Q	R	Q	I	V	N	A	G	R	A	T	G	S	Q	V	T	S	P	R	P	R	I	D	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														T	T	T	T													T	T												S	S	S									T	T	S			S	S			S	S
	.	.	.
Sequence	I	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)