Fold library entry viewer: c4upyB_

Added to library: Sat Aug 2 08:28:50 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	S	D	D	D	R	T	K	E	E	R	A	Y	D	K	A	K	R	R	I	E	K	R	R	L	E	H	S	K	N	V	N	T	E	K	L	R	A	P	V	I	C	V	L	G	H	V	D	T	G	K	T	K	I	L	D	K	L	R	H	T	H	V	Q	D	Q	Q	I	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												S	S	S		S		S	S											S	T	T	S	S														T			B	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	N	V	P	L	E	A	I	N	E	Q	T	K	M	I	K	N	F	D	R	E	N	V	R	I	P	G	M	L	I	I	D	T	P	G	H	E	S	F	S	N	L	R	N	R	G	S	S	L	C	D	I	A	I	L	V	V	D	I	M	H	G	L	E	P	Q	T	I	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S		G	G	G	G	G		G	G	G	G	T											T	T	T		G	G	G				T	T			S		S								T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	N	L	L	K	S	K	K	C	P	F	I	V	A	L	N	K	I	D	R	L	Y	D	W	K	K	S	P	D	S	D	V	A	A	T	L	K	K	Q	K	K	N	T	K	D	E	F	E	E	R	A	K	A	I	I	V	E	F	A	Q	Q	G	L	N	A	A	L	F	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T										G	G	G	S	T	T					T	T								T	T	S																						T	T						G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	K	D	P	R	T	F	V	S	L	V	P	T	S	A	H	T	G	D	G	M	G	S	L	I	Y	L	L	V	E	L	T	Q	T	M	L	S	K	R	L	A	H	C	E	E	L	R	A	Q	V	M	E	V	K	A	L	P	G	M	G	T	T	I	D	V	I	L	I	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T	T	S								S	S	S		T	T																	S	G	G	G	S					T	T	S									T	T	S										S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	L	K	E	G	D	T	I	I	V	P	G	V	E	G	P	I	V	T	Q	I	R	G	L	L	L	P	P	P	Q	Y	E	K	H	K	E	V	E	A	A	Q	G	V	K	I	L	G	K	D	L	E	K	T	L	A	G	L	P	L	L	V	A	Y	K	E	D	E	I	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T								S	S																					S				S	S								S	S		S	S			T	T								S		T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	K	D	E	L	I	H	E	L	K	Q	T	L	N	A	I	K	L	E	E	K	G	V	Y	V	Q	A	S	T	L	G	S	L	E	A	L	L	E	F	L	K	T	S	E	V	P	Y	A	G	I	N	I	G	P	V	H	K	K	D	V	M	K	A	S	V	M	L	E	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									S	S									S							S	S														T	T				S					S	S	B													S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	Q	Y	A	V	I	L	A	F	D	V	R	I	E	R	D	A	Q	E	M	A	D	S	L	G	V	R	I	F	S	A	E	I	I	Y	H	L	F	D	A	F	T	K	Y	R	Q	D	Y	K	K	Q	K	Q	E	E	F	K	H	I	A	V	F	P	C	K	M	K	I	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S							S			B										S	T	T							S																										T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	Y	I	F	N	S	R	D	P	I	V	M	G	V	T	V	E	A	G	Q	V	K	Q	G	T	P	M	C	V	P	S	K	N	F	V	D	I	G	I	V	T	S	I	E	V	N	H	K	Q	V	D	V	A	K	K	G	Q	E	V	C	V	K	I	E	P	I	P	G	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S	B													T	T						S	S			S	S											T	T				S				G	G	G			B							T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Sequence	P	K	M	F	G	R	H	F	E	A	T	D	I	L	V	S	K	I	S	R	Q	S	I	D	A	L	K	D	W	F	R	D	E	M	Q	K	S	D	W	Q	L	I	V	E	L	K	K	V	F	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S			T	T														T	T	T	T																			T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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