Fold library entry viewer: c4upkC_

Added to library: Sat Jul 4 08:59:04 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	S	N	V	L	F	I	I	I	D	Q	L	R	A	D	C	L	W	G	A	L	A	D	H	V	E	L	P	H	L	R	A	L	A	Q	D	A	V	S	F	R	R	H	Y	S	V	T	N	P	C	G	P	S	R	A	S	I	L	T	G	Q	Y	A	M	N	H	R	S	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T							S	S	T	T	G	G	G	S											T	S									S	B		S																					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	G	T	P	L	R	H	D	T	P	N	I	A	T	E	M	R	K	A	G	Y	L	P	L	L	F	G	Y	T	D	T	S	Q	D	P	R	A	Y	D	A	N	D	P	A	L	K	T	Y	E	F	P	M	R	G	F	H	E	V	T	E	M	R	L	E	M	S	Y	P	W	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					T	T											T	T															G	G	G	S		T	T		G	G	G	S		T	T				T	T									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	H	L	K	N	R	G	Y	A	F	D	D	Y	A	Q	V	Y	V	P	R	P	D	A	D	G	T	P	R	L	N	G	P	A	M	Y	R	A	E	D	S	D	T	A	F	L	T	D	Q	F	L	A	N	M	P	A	W	A	G	Q	N	W	F	A	H	L	T	Y	I	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T				S	S	G	G	G	G	G	S					T	T	S				T	T				S	S		G	G	G	S													S	G	G	G	T	T	S											S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	P	P	L	V	A	P	A	P	Y	N	T	M	Y	D	P	A	K	L	P	L	P	A	R	L	P	G	R	D	D	E	T	A	E	H	P	F	F	G	P	A	T	R	Y	S	S	P	A	S	F	V	L	G	F	P	D	L	E	P	T	D	E	T	I	Q	T	L	R	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S					T	T	T	T	T	S	S		G	G	G	S							S	S									T	T										G	G	G	S	S	S	S		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	L	G	L	A	T	E	V	D	T	H	I	G	R	V	I	A	H	L	K	E	T	G	Q	Y	D	D	T	L	I	V	V	T	A	D	H	G	E	M	L	G	D	R	H	S	W	G	K	M	T	V	Y	D	A	A	Y	H	T	P	L	I	I	R	A	P	G	C	K	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T		S	T	T								S					T	T	G	G	G			S	S		S	S	S	G	G	G	T	B								T	T			T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	V	V	E	A	P	T	E	S	I	D	L	M	P	T	I	L	D	W	V	G	Q	E	I	P	N	A	V	D	G	R	S	L	R	P	F	L	T	G	E	A	P	S	D	W	R	Q	Y	S	F	S	E	L	D	I	S	E	P	L	D	P	T	L	W	Q	Q	E	F	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G										T					T	T			S								T	T				T	T			S	S										S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	P	S	A	G	A	V	A	I	L	R	D	A	R	F	T	L	V	E	F	A	A	D	L	P	P	M	L	F	D	H	Q	G	E	G	E	F	R	N	V	A	G	D	P	A	H	A	A	D	L	A	R	L	S	R	Q	M	L	R	H	R	M	R	N	M	D	H	T	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S									S	S							S	S	S								T	T	T	T	B	T	T	S			T	T		G	G	G																		T	S			S	S	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Sequence	L	C	S	I	T	H	E	G	A	R	T	Q	R	R	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T	T							S

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PDB structure

FASTA sequence

Hidden Markov model

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