Fold library entry viewer: c4upiA_

Added to library: Sat Jul 4 08:58:41 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	R	N	I	L	W	I	M	C	D	Q	L	R	F	D	Y	L	S	C	Y	G	H	E	R	L	N	T	P	N	I	D	K	L	A	K	R	G	V	R	F	T	N	A	Y	V	Q	A	T	V	C	G	P	S	R	M	S	A	Y	T	G	R	Y	V	R	S	H	G	S	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T			G	G	G	S	G	G	G	T		S	S												T	S				S	S				S	S	S	S											T	S									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	G	I	P	L	R	V	G	E	P	T	L	G	D	H	L	R	D	V	G	M	R	N	V	L	I	G	K	T	H	M	R	P	D	L	D	G	M	K	R	L	G	I	D	P	D	S	E	I	G	A	R	V	G	E	G	G	F	D	A	F	D	R	D	D	G	V	H	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					T	T										T	T	T																					T	T			T	T	S								T	T	T									S				T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	Y	R	K	K	E	P	A	Y	N	D	Y	L	R	H	A	G	F	Q	A	E	N	P	W	E	F	W	A	N	S	A	E	G	K	G	G	E	N	Q	S	G	W	L	L	T	H	A	D	K	P	A	R	V	P	E	E	H	S	E	T	A	Y	M	T	R	R	A	M	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S												T	T				S	S					T	T	S					T	T	S					T	T	S	G	G	G	T	T	S			S	S		G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	E	A	A	E	K	D	G	R	P	W	C	A	H	L	S	Y	I	K	P	H	W	P	Y	I	V	P	A	P	Y	H	D	M	F	G	P	D	D	V	K	P	A	V	R	S	D	E	E	L	K	A	A	H	P	L	F	K	A	M	T	E	E	V	Y	S	R	N	F	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		S												S	S	S					T	T	G	G	G	S			G	G	G	S											T	T										T	S							T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	E	V	R	E	K	V	I	P	A	Y	M	G	L	I	K	Q	I	D	D	Q	L	G	Q	L	F	A	F	M	Q	E	R	G	L	D	E	N	T	M	I	V	F	T	A	D	H	G	D	Y	L	G	D	H	W	M	G	E	K	Y	L	F	Y	E	A	A	A	K	V	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	T	G	G	G	T								S					T	T	G	G	G			S			S							B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	I	Y	D	P	S	D	K	A	D	A	T	R	G	T	V	S	D	A	L	V	E	M	I	D	L	A	P	T	F	V	D	Y	A	G	G	V	P	P	M	H	I	L	E	G	K	S	L	L	P	L	L	H	D	D	D	S	S	W	D	R	Q	Y	V	F	S	E	L	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	G	G	G	G	G	G	T	T									G	G	G									T	T					T	T	T			S			S							T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	N	L	P	A	R	L	K	L	G	R	D	I	Q	D	C	R	A	T	M	V	F	D	G	R	Y	K	L	V	E	V	M	G	F	A	P	I	L	F	D	L	E	V	D	P	D	E	L	K	D	L	G	R	D	P	S	A	E	E	V	R	Q	R	L	T	S	A	L	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T					T	T			G	G	G									S	S							T	T	S							T	T	T		T	T						T	T		G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Sequence	W	H	R	N	T	R	Q	R	I	T	K	S	D	A	A	Y	R	A	L	D	P	V	L	R	E	S	D	P	D	L	M	A	G	V	I	I	G	Y	W	D	E	D	E	V	E	A	E	K	R	R	I	A	R	I	L	G	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S		S					T	T							S		G	G	G	G	G	T				S			S

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PDB structure

FASTA sequence

Hidden Markov model

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