PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4unfA_

Fold library id	PDB Header	Molecule	Title
c4unfA_	PDB header: lyase	Chain: A: PDB Molecule: endonuclease iii-1;	PDBTitle: crystal structure of deinococcus radiodurans endonuclease iii-1

Links to external resources
Added to library: Sat Jun 13 08:28:16 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P L N A A R P A E E R A A L L A W V K E R L H E E Y G D Q D P T P R R D P M H E L I S T I L S Q R T T H A D E E A A Y Q E L R T L G D W D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
T T
S
T T
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A I T L A P T D A V A H A I R R S N Y P E S K A P R I Q E T L R R I K A A P G G Y D L D F L R D L P V K D A L K W L T D L P G V G V K T A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S S S S S S S S
G G G G G S
T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V L L F N Y A R P V F P V D T H V H R V S T R V G V I P R M G E Q A A H R A L L A L L P P D P P Y L Y E L H I N F L S H G R Q V C T W T R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T S S
S
T T S
S
T S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence P K C G K C I L R E R C D A Y A L Y G D K V P S F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T G G G
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	L	N	A	A	R	P	A	E	E	R	A	A	L	L	A	W	V	K	E	R	L	H	E	E	Y	G	D	Q	D	P	T	P	R	R	D	P	M	H	E	L	I	S	T	I	L	S	Q	R	T	T	H	A	D	E	E	A	A	Y	Q	E	L	R	T	L	G	D	W	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S																					T	T				S																T	T															T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	I	T	L	A	P	T	D	A	V	A	H	A	I	R	R	S	N	Y	P	E	S	K	A	P	R	I	Q	E	T	L	R	R	I	K	A	A	P	G	G	Y	D	L	D	F	L	R	D	L	P	V	K	D	A	L	K	W	L	T	D	L	P	G	V	G	V	K	T	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S									T	T	T	S	S	S																		S	S	S	S	S			G	G	G	G	G	S											T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	L	L	F	N	Y	A	R	P	V	F	P	V	D	T	H	V	H	R	V	S	T	R	V	G	V	I	P	R	M	G	E	Q	A	A	H	R	A	L	L	A	L	L	P	P	D	P	P	Y	L	Y	E	L	H	I	N	F	L	S	H	G	R	Q	V	C	T	W	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																T	S	S		S												T	T	S		S																			T	S		S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	P	K	C	G	K	C	I	L	R	E	R	C	D	A	Y	A	L	Y	G	D	K	V	P	S	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G		T	T	G	G	G								G	G	G