Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4umlA_

Fold library idPDB HeaderMoleculeTitle
c4umlA_PDB header: signaling proteinChain: A: PDB Molecule: ganglioside-induced differentiation-associated protein 2;PDBTitle: crystal structure of ganglioside induced differentiation2 associated protein 2 (gdap2) macro domain


Added to library: Sat May 31 08:18:04 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSQFVDVDTLPSWGDSRSPFLYNKDVNGKVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPD
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)

SSB
GGGS

TTT


SS


TTS
GGGB
SS

TTS




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKEDLQKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGF
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)



TT

TTSSSS





GGGTT
S
 .........150.........160.........170.........180.........190.........200.
Sequence CVINSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAVSDLEEGTYQKLLPLYFPRSL
Predicted secondary structure





















SS confidence




























































Known secondary structure (DSSP)

SS
GGGT

GGG


S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D