Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4uisA_

Fold library idPDB HeaderMoleculeTitle
c4uisA_PDB header: hydrolaseChain: A: PDB Molecule: gamma-secretase;PDBTitle: the cryoem structure of human gamma-secretase complex


Added to library: Sat Jun 13 08:28:29 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPLNKTAPCVRLLNATHQIGCQSSISGDTGVIHVVEKEEDLQWVLTDGPNPPYMVLLESKHFTRDLMEKL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
B







SS
S

B
SS



SSTT
SS




BTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence KGRTSRIAGLAVSLTKPSPASGFSPSVQCPNDGFGVYHCREIQWNSLGNGLAYEDFSFPIFLLEDENETK
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP) T
SS

S


SS

SS

B
S
SSTT
SSS







TTTTB


TTS

SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence VIKQCYQDHNLSQNGSAPTFPLCAMQLFSHMHAVISTATCMRRSSIAAVCDPLSDYNVWSMLKPIADDVV
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)


SS



SS

B



S
SS









BSS




 .........220.........230.........240.........250.........260.........270.........280
Sequence VAATRLDSRSFAWNVAPGAESAVASFVTQLAAAEALQKAPDVTTLPRNVMFVFFQGETFDYIGSSRMVYD
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)






SSSSS


STTTT
GGGG

S


TTTTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence MEKGKFPVQLENVDSFVELGQVALRTSLELWMHTDPVQKNESVRNQVEDLGAGVPAVILRSGVPLPPSSL
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TT
SS

TTS

B


STTS

SS



B




SSS









S
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence QRFLRARNISGVVLADHSGAFHNKYYQSIYDTAENINVSYPEWLAPEEDLNFVTDTAKALADVATVLGRA
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TTS




BS
SSS
S
S
SS
TT
ST


SS

TTS


ST
 .........430.........440.........450.........460.........470.........480.........490
Sequence LYELAGGDTVQADPQTVTRLLYGFLIKLRQDLRSYLGDGPLQHYIAVSSPTNTTYVVQYALANLTGTVVX
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) T






T

GGG
SS

S
SS





SSSS
T




 .........500.........510.........520.........530.........540.........550.........560
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARLARALSPAQWSSTEYSTWTESRWKAIRARI
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP)












B





B



S




S






STT







 .........570.........580........
Sequence FLIASXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure























SS confidence



























Known secondary structure (DSSP)


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D