Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ui9I_

Fold library idPDB HeaderMoleculeTitle
c4ui9I_PDB header: cell cycleChain: I: PDB Molecule: anaphase-promoting complex subunit 4;PDBTitle: atomic structure of the human anaphase-promoting complex


Added to library: Sat Jun 20 08:40:24 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TCFPSFRVVGEKQLPQEIIFLVWSPKRDLIALANTAGEVLLHRLASFHRVWSFPPNENTGKEVTCLAWRP
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)



S



B

B
SS

SSSS
TTS

SGGG



SSS
S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DGKLLAFALADTKKIVLCDVEKPESLHSFSVEAPVSCMHWMEVTVESSVLTSFYEDESNLLLPKLPTLPK
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) SSSSSS

SSSSS

SS

S

TTT








SS





S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NYSNTSKIFSEENSDEIIKLLGDVRLNILVLGGSSGFIELYAYGMFKIARVTGIAGTCLALCLSSDLKSL
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)



S

SSSSTT
TTSS


TTSTTT


S
TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SVVTEVSTNGASEVSYFQLETNLLYSFLPEVTRMARKFTHISALLQYINLSLTCMCEAWEEILMQMDSRL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) B

SS



T
 .........290.........300.........310.........320.........330.........340.........350
Sequence TKFVQEKNTTTSVQDEFMHLLLWGKASAELQTLLMNQLTVKGLKKLGQSIESSYSSIQKLVISHLQSGSE
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) S
SSS
STT

SS
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLLYHLSELKGMASWKQKYEPLGLDAAGIEEAITAVGSFILKANELLQVIDSSMKNFKAFFRWLYVAMLR
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)
TTTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence MTDKMTQKDITFVAEFLTEHFNFNVERVGQYLKDEDDDLVSPPNTEGNQWYDFLQNSSHLKESPLLFPYY
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)




T




T
SSSS
SS



S
SSSS
SSS



 .........500.........510.........520.........530.........540.........550.........560
Sequence PRKSLHFVKRRMENIIDQCLQKPADVIGKSMNQAICIPLYRDTRSEDSTRRLFKFPFLWNNKTSNLHYLL
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) TTS
TT



STTTS
S

TT

STTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence FTILEDSLYKMCILRRHTDISQSVSNGLIAIKFGSFTYATTEKVRRSIYSCLDAQFYDDETVTVVLKDTV
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) SSSSSSTT


S
S
TTT




TTSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence GREGRDRLLVQLPLSLVYNSEDSAEYQFTGTYSTRLDEQCSAIPTRTMHFEKHWRLLESMKAQYVAGNGF
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP)
TTTS
GGGTS
TTTGGG



S
TTS
STT
STTS

SS
TT


SS
 .........710.........720.........730
Sequence RKVSCVLSSNLRHVRVFEMDIDDEWELDES
Predicted secondary structure


















SS confidence





























Known secondary structure (DSSP) S
TTSSBTTS

SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D