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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4uftB_

Fold library idPDB HeaderMoleculeTitle
c4uftB_PDB header: rna binding proteinChain: B: PDB Molecule: nucleoprotein;PDBTitle: structure of the helical measles virus nucleocapsid


Added to library: Sat May 2 08:11:22 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MATLLRSLALFKRNKDKPPITSGSGGAIRGIKHIIIVPIPGDSSITTRSRLLDRLVRLIGNPDVSGPKLT
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Known secondary structure (DSSP)

GGGGTS






TTTS




B


SSSSSSS
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence GALIGILSLFVESPGQLIQRITDDPDVSIRLLEVVQSDQSQSGLTFAEDEADQYFSHSRFGWFENKEISD
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Known secondary structure (DSSP) S
SSS



SSB




SS
SSS







SSSS



S

BSSTT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence IEVQDPEGFNMILGTILAQIWVLVAKAVTAPDTAADSELRRWIKYTQQRRVVGEFRLERKWLDVVRNRIA
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Known secondary structure (DSSP) T

S
STTTTSS



SS
TTTTTSSSSS
S


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence EDLSLRRFMVALILDIKRTPGNKPRIAEMICNIDTYIVEAGLASFILTIKFGIETMYPALGLHEFDGELS
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Known secondary structure (DSSP)
SS

SS

TT
TTTT
TTT

SSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLESLMNLYQQMGETAPYMVILENSIQNKFSAGSYPLLWSYAMGVGVELENSMGGLNFGRSYFDPAYFRL
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Known secondary structure (DSSP)
SSSS

SSS
GGGTTTSSTTS
TTTT
S

SS




TT

 .........360.........370.......
Sequence GQEMVRRSAGKVSSTLASELGITAEDA
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Known secondary structure (DSSP) SSS




SSS

SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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