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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ud8B_

Fold library idPDB HeaderMoleculeTitle
c4ud8B_PDB header: oxidoreductaseChain: B: PDB Molecule: fad-binding and bbe domain-containing protein;PDBTitle: atbbe15


Added to library: Sat Jun 13 08:40:02 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLQQDFVKCLVDVSFPITASFFSPDQNATLFKEELESTAQNLRYLTPSNPKPVFIFEPLYETHVQAAVVC
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Known secondary structure (DSSP)



SS





BGGGSSTTS


S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKKLQLHLRLRSGGHDYEGLSFVAEDETPFVIVDLSKLRQVDVDLDSNSAWAHAGATIGEVYYRIQEKSQ
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Known secondary structure (DSSP) TT
SS


TT
TTT

SS

S
TT


TTTTTTSB
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence THGFPAGLCSSLGIGGHLVGGAYGSMMRKFGLGADNVLDARIVDANGQILDRAAMGEDVFWAIRGGGGGS
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Known secondary structure (DSSP) T



SSTT
BGGG



TT

GGGG
TTS

TTTS
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FGVILAWKIKLVPVPATVTVFTVTKTLEQDGTKVLYKWEQIADKLDDDLFIRVIISPASKNRTISMSYQA
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Known secondary structure (DSSP) S



S
GGGTGGGS
TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence QFLGDSNRLLQVMQKSFPELGLTKKDCTEMSWIKSVMYIAGFPNSAAPEALLAGKSLFKNHFKAKSDFVK
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Known secondary structure (DSSP) SS

GGG


GGG

T

TT

GGGGGG


S

BS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EPIPVEGLEGLWERFLEEDSPLTIWNPYGGMMSRISESEIPFPHRNGTLFKIQWLSTWQDGKVSEERHMK
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Known secondary structure (DSSP) S


TTSSS

GGGGTS
TTSSS



TT

SSGGGT
 .........430.........440.........450.........460.........470.........480.........490
Sequence WIREMYSYMEQYVSKNPRQAYVNYRDLDLGTNEGETDAREWGAKYYKGNFERLVKIKGEFDPDNFFRHEQ
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Known secondary structure (DSSP) TTTS

SS



TTS

GGG

SSSSS
GGG
TT

S

TT
 .......
Sequence SVPTKIG
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Known secondary structure (DSSP)


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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