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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4ud1B_ | PDB header: viral protein | Chain: B: PDB Molecule: n protein; | PDBTitle: structure of the n terminal domain of the mers cov nucleocapsid |
Added to library: Sat Dec 5 08:11:56 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | P | K | P | R | A | A | P | N | N | T | V | S | W | Y | T | G | L | T | Q | H | G | K | V | P | L | T | F | P | P | G | Q | G | V | P | L | N | A | N | S | T | P | A | Q | N | A | G | Y | W | R | R | Q | D | R | K | I | N | T | G | N | G | I | K | Q | L | A | P | R | W | Y | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | B | ![]() | ![]() | ![]() | S | S | T | T | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Sequence | Y | Y | T | G | T | G | P | E | A | A | L | P | F | R | A | V | K | D | G | I | V | W | V | H | E | D | G | A | T | D | A | P | S | T | F | G | T | R | N | P | N | N | D | S | A | I | V | T | Q | F | A | P | G | T | K | L | P | K | N | F | H | I | E | |||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | S | T | T | T | T | S | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | B | T | T | T | B | T | T | T | T | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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