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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4u9cA_

Fold library idPDB HeaderMoleculeTitle
c4u9cA_PDB header: lactoferrin-binding proteinChain: A: PDB Molecule: lactoferrin-binding protein b;PDBTitle: structure of the lbpb n-lobe from neisseria meningitidis


Added to library: Sat Oct 25 09:15:30 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVNRPAVGAAMRLPRRNIASYKPDKHQAEEHLPLKEKDILFLDGTLKEQADKLKKKINERYSDVRVITSK
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Known secondary structure (DSSP)
TT


S

B







TT

S
S


GGG


S

TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEEEKYQYQFVRAGYVFTRAEGKDNEKEKTSEFVNRFSYDGFVYYSGERPSQSLPSAGTVQYSGNWQYMT
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Known secondary structure (DSSP) TTT
SS

TT








S

SB
S


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DAKRHRTGSTDLGYTTYYGNEIGATSYEARDADDREKHPAEYTVDFDNKTLNGKLIKNQYVNPNEPKKPL
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Known secondary structure (DSSP)
S
S


TTTTBSTTBTTTB

BGGGB
SB
TT
SSTTTTB


TTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence TIYDITATLDGNRFTGSAKVSTEVKTQHADKEYLFFHTDADQRLEGGFFGDNGEELAGRFISNDNSVFGV
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Known secondary structure (DSSP) TT

TTTGGGTS
S
STTSS
TTS
 ......
Sequence FAGKQK
Predicted secondary structure
SS confidence





Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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