PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4u8uM_

Fold library id	PDB Header	Molecule	Title
c4u8uM_	PDB header: oxygen storage/transport	Chain: M: PDB Molecule: linker l1;	PDBTitle: the crystallographic structure of the giant hemoglobin from2 glossoscolex paulistus at 3.2 a resolution.

Links to external resources
Added to library: Sat Jun 13 08:31:09 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T Y K D R R F Q Y I L T N Q H L F I D K L E R D L H E I D D E F K K L G S D V K D Q T V R H L K A R I S N L E G D D C K E H E A P C G G D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P Q C I S D L F F C D G H K D C K N G R D E D K E V C S E V P A D I G S S F A G V V S W Q A C E E A T P H H A V V T I T A N E R K E F F K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T S S S
S T T
G G G
T T T T
G G G
T T
S S S
S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R I W V R A I L A F E E E E H E H H I K T F Q L R G Y Y S F G D R T L A L G P E R G T K P V Y G V R C H F D R G D D D H A D C Q I V N P A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T T T
T T S
S
S S S T T
T T T

. . . . . . . . . 220 . .

Sequence L F V C G N F A A E R H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	Y	K	D	R	R	F	Q	Y	I	L	T	N	Q	H	L	F	I	D	K	L	E	R	D	L	H	E	I	D	D	E	F	K	K	L	G	S	D	V	K	D	Q	T	V	R	H	L	K	A	R	I	S	N	L	E	G	D	D	C	K	E	H	E	A	P	C	G	G	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		T	S																										T	T						S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	Q	C	I	S	D	L	F	F	C	D	G	H	K	D	C	K	N	G	R	D	E	D	K	E	V	C	S	E	V	P	A	D	I	G	S	S	F	A	G	V	V	S	W	Q	A	C	E	E	A	T	P	H	H	A	V	V	T	I	T	A	N	E	R	K	E	F	F	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	T	T	S	S	S			S	T	T		G	G	G		T	T	T	T			G	G	G		T	T										S	S	S					S														T	T		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	I	W	V	R	A	I	L	A	F	E	E	E	E	H	E	H	H	I	K	T	F	Q	L	R	G	Y	Y	S	F	G	D	R	T	L	A	L	G	P	E	R	G	T	K	P	V	Y	G	V	R	C	H	F	D	R	G	D	D	D	H	A	D	C	Q	I	V	N	P	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T														T	T	T	T								T	T	S		S										S	S	S	T	T									T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	L	F	V	C	G	N	F	A	A	E	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)