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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4u63A_

Fold library idPDB HeaderMoleculeTitle
c4u63A_PDB header: lyaseChain: A: PDB Molecule: dna photolyase;PDBTitle: crystal structure of a bacterial class iii photolyase from2 agrobacterium tumefaciens at 1.67a resolution


Added to library: Sat Mar 28 08:21:41 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSIASSLKTAPVIVWFRKDLRLSDNLALLAAVEHGGPVIPVYIREKSAGPLGGAQEWWLHHSLAALSSSL
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Known secondary structure (DSSP)

SS






SS


STT

S

SSSS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EKAGGRLVLASGDAERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRDDGLTVRSFSGQLLHEPS
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Known secondary structure (DSSP) TT


S






STT


S
SS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RLQTKSGGPYRVYTPFWRALEGSDEPHAPADPPKSLTAPKVWPKSEKLSNWKLLPTKPDWAKDFSDIWTP
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Known secondary structure (DSSP) T


TTS



SS









S




SS





GGGG

S

SS
TTTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence GETGALDKLDDFIDGALKGYEEGRDFPAKPATSLLSPHLAAGEISPAAVWHATKGLSRHIASNDISRFRK
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Known secondary structure (DSSP) STTTTTTTT
TTS

S


TTSS
TTSS
TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EIVWREFCYHLLFHFPELGEKNWNDSFDAFSWRDDEKSFKAWTRGMTGYPIVDAGMRQLWQHGTMHNRVR
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Known secondary structure (DSSP)
TTTTTS
SSGGGTT





TT
SS
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence MIVASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEKFDGDGDY
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Known secondary structure (DSSP) TTS



TT

TTT
STTS

TT



STT
 .........430.........440.........450.........460.........470.........480..
Sequence VRRFVPELEKLERKYIHKPFEAPKDALKKAGVELGKTYPLPIVDHGKARERALAAYAAVKKT
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Known secondary structure (DSSP)
GGGTTS
T
GGGS
T

BTTTB


SS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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