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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4u1cC_

Fold library idPDB HeaderMoleculeTitle
c4u1cC_PDB header: translationChain: C: PDB Molecule: eukaryotic translation initiation factor 3 subunit c;PDBTitle: crystal structure of the eif3a/eif3c pci-domain heterodimer


Added to library: Sat Sep 13 08:20:49 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLIPSRFDASANLSYQPIDQWKS
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Known secondary structure (DSSP)
TSSS



STTTSSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKEDSDGVKRILGSIFSFVERLDDEFMKSLLNIDPH
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Known secondary structure (DSSP) TTGGG
TTT




TTTTTT





STTTTSS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SSDYLIRLRDEQSIYNLILRTQLYFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNIIP
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Known secondary structure (DSSP) S


TTTTS
T

 .........220.........230.........240.........250.........260.........270.........280
Sequence AQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQT
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Known secondary structure (DSSP) S



SS
TT
TTTTTSS
S


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NINQFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADE
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Known secondary structure (DSSP) S
STT
T
TTTT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence RARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEHYDKLSFQGPPET
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Known secondary structure (DSSP) TTS

GGG


TT

SS




TT
T
S


S

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAK
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Known secondary structure (DSSP) T
T
GGGGG
TTTTT
S
 .........500.........510.........520.........530.........540....
Sequence LAELFDLPENKVVEVLQSVIAELEIPAKLNDEKTIFVVEKGDEITKLEEAMVKL
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Known secondary structure (DSSP) T

T
S
TTTT

S

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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