PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4u10B_

Fold library id	PDB Header	Molecule	Title
c4u10B_	PDB header: hydrolase	Chain: B: PDB Molecule: poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase;	PDBTitle: probing the structure and mechanism of de-n-acetylase from2 aggregatibacter actinomycetemcomitans

Links to external resources
Added to library: Sat Jan 17 08:24:09 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D R Y G V L A Y H S V V D D T A A K E E K Q Y F P Q T I S A N L L I S H F N W L K D N G Y N V V S W Q Q I I D A E N G K S T L P E K A V V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S S T T
T T
T T S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S F D D G Y A T X Y N V I Y P I L K A Y N Y P A V F A P V S S W L D T P V N Q L I P Y A N I K L P R N V F V T W D Q V R E X E Q S G L V E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T T
T S
T T S T T G G G B
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A S H T D N L H H G V R A N P A G S Q L P A V V A P E Y K N N R Y E S K T E Y K N R L V Q D F S R S S K S I Q R Q I G K K P R I X V W P Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
S
S T T
T T T S
T T
S S
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . .

Sequence Q F N D V A I D A A K Q S G X T H H F A L G Q K I I N K I G D R Y V G R L L I D T E T G F S T I K N F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
T T
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	R	Y	G	V	L	A	Y	H	S	V	V	D	D	T	A	A	K	E	E	K	Q	Y	F	P	Q	T	I	S	A	N	L	L	I	S	H	F	N	W	L	K	D	N	G	Y	N	V	V	S	W	Q	Q	I	I	D	A	E	N	G	K	S	T	L	P	E	K	A	V	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S				T	T				S	S	T	T																	T	T														T	T	S	S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	F	D	D	G	Y	A	T	X	Y	N	V	I	Y	P	I	L	K	A	Y	N	Y	P	A	V	F	A	P	V	S	S	W	L	D	T	P	V	N	Q	L	I	P	Y	A	N	I	K	L	P	R	N	V	F	V	T	W	D	Q	V	R	E	X	E	Q	S	G	L	V	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B	T					T									T													T	S		T	T	S					T	T					G	G	G	B												T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	H	T	D	N	L	H	H	G	V	R	A	N	P	A	G	S	Q	L	P	A	V	V	A	P	E	Y	K	N	N	R	Y	E	S	K	T	E	Y	K	N	R	L	V	Q	D	F	S	R	S	S	K	S	I	Q	R	Q	I	G	K	K	P	R	I	X	V	W	P	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B			S	S			S					S	T	T						T	T	T	S					T	T																												S	S								G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Sequence	Q	F	N	D	V	A	I	D	A	A	K	Q	S	G	X	T	H	H	F	A	L	G	Q	K	I	I	N	K	I	G	D	R	Y	V	G	R	L	L	I	D	T	E	T	G	F	S	T	I	K	N	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T							S	T	T						T	T		S									T	T