Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4tw1N_

Fold library idPDB HeaderMoleculeTitle
c4tw1N_PDB header: toxinChain: N: PDB Molecule: possible leukocidin subunit;PDBTitle: crystal structure of the octameric pore complex of the staphylococcus2 aureus bi-component toxin lukgh


Added to library: Sat Nov 15 08:11:53 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)



GGGSSTTTT
TT
SS



TTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQN
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) S
SSS






TTT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence YDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNP
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)
TT

SS
TTTT
TTTTB


S
B
SS
GGGGB

GGGS
T

 .........220.........230.........240.........250.........260.........270.........280
Sequence EFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYS
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)


TT



BSS



TTTT
 ........
Sequence DDNKPYKE
Predicted secondary structure







SS confidence







Known secondary structure (DSSP) SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D