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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4tw1E_

Fold library idPDB HeaderMoleculeTitle
c4tw1E_PDB header: toxinChain: E: PDB Molecule: possible leukocidin subunit;PDBTitle: crystal structure of the octameric pore complex of the staphylococcus2 aureus bi-component toxin lukgh


Added to library: Sat Nov 15 08:12:49 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYS
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Known secondary structure (DSSP)


TTTT
TT
SS


SSTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQPSYRT
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SS
SS






TT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKDNFTPKDKMPVTVSE
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Known secondary structure (DSSP) TT

SS

TT
SSTTTT

SSSB

TTBS
SS
SS
STT
B

GGGS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTH
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Known secondary structure (DSSP)



TT

S

SSS
TT

TTTT
 .........290
Sequence NVKFVKVLND
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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