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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4tvpG_

Fold library idPDB HeaderMoleculeTitle
c4tvpG_PDB header: viral protein/immune systemChain: G: PDB Molecule: envelope glycoprotein gp160;PDBTitle: structure of bg505 sosip.664 in complex with broadly neutralizing2 antibodies, pgt122 and 35o22


Added to library: Sat Oct 11 08:38:44 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNM
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Known secondary structure (DSSP)

S
S







B



SSSGGG
TTT
TT
SS




SS



TT

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYR
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Known secondary structure (DSSP) TTSSS
B
GGG
S


B
S



TTS





SSSSS

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDVVQINSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTH
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Known secondary structure (DSSP) TT




TTTTT


SSS





B

B

TT

S


SSSSB

 .........220.........230.........240.........250.........260.........270.........280
Sequence GIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATG
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Known secondary structure (DSSP)
B




SSS



SSS
S
SS
TTS


B



SSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence DIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGL
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Known secondary structure (DSSP)

BS



TTTS
SS







TT
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence FNSTWISNNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGG
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Known secondary structure (DSSP) S





S

TT
SS




S





TTT

 .........430.........440.........450...
Sequence GDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
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Known secondary structure (DSSP)

TTTSTT

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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