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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4tszM_

Fold library idPDB HeaderMoleculeTitle
c4tszM_PDB header: transferaseChain: M: PDB Molecule: dna polymerase iii subunit beta;PDBTitle: crystal structure of dna polymerase sliding clamp from pseudomonas2 aeruginosa with ligand


Added to library: Sat Sep 13 08:24:06 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMHFTIQREALLKPLQLVAGVVEQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLEDAAEPGEITVP
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Known secondary structure (DSSP)

TT



SGGGGTT
SS

S

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence ARKLMDICKSLPNDVLIDIRVEEQKLLVKAGRSRFTLSTLPANDFPEGPGSLNFSIAQSKLRRLIDRTSF
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Known secondary structure (DSSP) S
TT
TTTT
B
GGG




TTGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence AMAQQDVRYYLNGMLLEVNGGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGE
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Known secondary structure (DSSP) GS
SS
SSGGGSTT
SS




SS



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VGIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRGIRL
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Known secondary structure (DSSP) SS
SS

SS



GGGGS




TTS
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QLSNGLLKIQANNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGTEQVRFILSDSNSSALVHEAD
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Known secondary structure (DSSP) TT
TT


B

S

TT

SS

TTS
SS
 .........360...
Sequence NDDSAYVVMPMRL
Predicted secondary structure



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Known secondary structure (DSSP)
SS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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