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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4tr6A_

Fold library idPDB HeaderMoleculeTitle
c4tr6A_PDB header: dna binding proteinChain: A: PDB Molecule: dna polymerase iii subunit beta;PDBTitle: crystal structure of dna polymerase sliding clamp from bacillus2 subtilis


Added to library: Sat Sep 13 08:21:41 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHMKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSDISIESFIPKEEGDKEIVT
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Known secondary structure (DSSP)


TT

SS
SSGGGG
SS
SSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IEQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIP
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Known secondary structure (DSSP)
T
SSS
GGGTT
B
GGGS








S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TDLLKNLIRQTVFAVSTSETRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYNVVIPGKSL
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Known secondary structure (DSSP) TTGGGS


TTSGGGGTT
SS

S
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence TELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYPDTTSLIPQDSKTEIIVNTKEFLQAIDRA
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Known secondary structure (DSSP) S
SS


SSTT


S




TTTS
SS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLLAREGRNNVVKLSAKPAESIEISSNSPEIGKVVEAIVADQIEGEELNISFSPKYMLDALKVLEGAEIR
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Known secondary structure (DSSP) TTT

TTS


TTTTTT
SS



SS
 .........360.........370.........380
Sequence VSFTGAMRPFLIRTPNDETIVQLILPVRTY
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Known secondary structure (DSSP) STTTS

TT

S

B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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