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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4tqvI_

Fold library idPDB HeaderMoleculeTitle
c4tqvI_PDB header: transport proteinChain: I: PDB Molecule: algm1;PDBTitle: crystal structure of a bacterial abc transporter involved in the2 import of the acidic polysaccharide alginate


Added to library: Sat Jul 25 09:50:25 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ERLWKDIKRDWLLYAMLLPTIIWFLIFLYKPMIGLQMAFKQPWIGFDHFVTLFQSEQFIRAIKNTLTLSG
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Known secondary structure (DSSP)
STGGGGGS





SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSLLFGFPMPILLALMINEVYSKGYRKAVQTIVYLPHFISIVIVAGLVVTFLSPSTGVVNNMLSWIGLDR
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Known secondary structure (DSSP) TTTT

STGGGGS

TTTST


 .........150.........160.........170.........180.........190.........200.........210
Sequence VYFLTQPEWFRPIYISSNIWKEAGFDSIVYLAAIMSINPALYESAQVDGATRWQMITRITLPCIVPTIAV
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Known secondary structure (DSSP)

TTT
TTTTTSS
TTT

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLVIRLGHILEVGFEYIILLYQPTTYETADVISTYIYRLGLQGARYDIATAAGIFNAVVALVIVLFANHM
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Known secondary structure (DSSP) TTTSTT

GGG

TTS


 ......
Sequence SRRITK
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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