PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4tqlA_

Fold library id	PDB Header	Molecule	Title
c4tqlA_	PDB header: de novo protein	Chain: A: PDB Molecule: three helix bundle;	PDBTitle: computationally designed three helix bundle

Links to external resources
Added to library: Sat Oct 18 08:32:40 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y K Q M V Q E L E K A R D R M E K L Y K E M V E L I Q K A I E L M R K I F Q E V K Q E V E K A I E E M K K L Y D E A K K K I E Q M I Q Q I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q G G D K Q K M E E L L K R A K E E M K K V K D K M E K L L E K L K Q I M Q E A K Q K M E K L L K Q L K E E M K K M K E K M E K L L K E M K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q R M E E V K K K M D D E L L E K I K K N I D D L K K I A E D L I K K A E E N I K E A K K I A E Q L V K R A K Q L I E K A K Q V A E E L I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T T T

. . . . . . . . . 220 . . . . . . . . .

Sequence K I L Q L I E K A K E I A E K V L K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	K	Q	M	V	Q	E	L	E	K	A	R	D	R	M	E	K	L	Y	K	E	M	V	E	L	I	Q	K	A	I	E	L	M	R	K	I	F	Q	E	V	K	Q	E	V	E	K	A	I	E	E	M	K	K	L	Y	D	E	A	K	K	K	I	E	Q	M	I	Q	Q	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	G	G	D	K	Q	K	M	E	E	L	L	K	R	A	K	E	E	M	K	K	V	K	D	K	M	E	K	L	L	E	K	L	K	Q	I	M	Q	E	A	K	Q	K	M	E	K	L	L	K	Q	L	K	E	E	M	K	K	M	K	E	K	M	E	K	L	L	K	E	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	R	M	E	E	V	K	K	K	M	D	D	E	L	L	E	K	I	K	K	N	I	D	D	L	K	K	I	A	E	D	L	I	K	K	A	E	E	N	I	K	E	A	K	K	I	A	E	Q	L	V	K	R	A	K	Q	L	I	E	K	A	K	Q	V	A	E	E	L	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S										T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Sequence	K	I	L	Q	L	I	E	K	A	K	E	I	A	E	K	V	L	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)