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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4tqjA_

Fold library idPDB HeaderMoleculeTitle
c4tqjA_PDB header: sugar binding proteinChain: A: PDB Molecule: lectin 2;PDBTitle: structural basis of specific recognition of non-reducing terminal n-2 acetylglucosamine by an agrocybe aegerita lection


Added to library: Sat Jun 6 08:24:26 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TSNVITQDLPIPVASRGFADIVGFGLDGVVIGRNAVNLQPFLAVKNFAQNAGGWLTTKHVRLIADTTGTG
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Known secondary structure (DSSP)



SS

S


SSS

TT
SSTT


S
SBTTBS


TTT

SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KGDIVGFGNAGVYVSVNNGKNTFADPPKMVIANFGYDAGGWRVEKHLRYLADIRKTGRADIIGFGEKGVL
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Known secondary structure (DSSP) B

SSS
B
SSS
B
SS
S
SSSSSS


TTT

TT
SSS

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VSRNNGGLNFGPATLVLKDFGYDAGGWRLDRHLRFLADVTGNGHLDIVGFGDKHVFISRNNGDGTFAPAK
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Known secondary structure (DSSP)
B
STT
B


S
SBTTBT


TTT


SSSSS

SS

B
SSS
B


 .........220.........230.........240.........250.........260.........270.........280
Sequence SVIDNFCIDAGGWKIGDHPRFVADLTGDGTADIIGCGKAGCWVALNNGGGVFGQVKLVINDFGTDKGWQA
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Known secondary structure (DSSP) S
SBTTBS


TTTS

SSSSSS

SSS
B
SSS
B


S
SSGGGT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence AKHPRFIADLTGNGRGDVVGFGNAGVYVALNNGDGTFQSAKLVLKDFGVQQGWTVSKHRRFVVDLTGDGC
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Known secondary structure (DSSP) TT


SSSSS


SSS
B
SSS
B


S
SSTTTT

TTT

SSSSSS
 .........360.........370.........380.........390.........400...
Sequence ADIIGFGEKETLVSYNDGKGNFGPVKALTNDFSFSGGKWAPETTVCWMANLDS
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SS confidence




















































Known secondary structure (DSSP)

SS

B
SSS
B


STTS
GGGTT
TTT

SB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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