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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4toiA_

Fold library idPDB HeaderMoleculeTitle
c4toiA_PDB header: ribosomal proteinChain: A: PDB Molecule: 30s ribosomal protein s2,ribosomal protein s1;PDBTitle: crystal structure of e.coli ribosomal protein s2 in complex with n-2 terminal domain of s1


Added to library: Sat Jan 3 08:13:28 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVG
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Known secondary structure (DSSP)



TTTGGG

GGGGGGTT
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence TKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTREL
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Known secondary structure (DSSP)
STT

S


TTTTTTTTGGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVT
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Known secondary structure (DSSP) TTTTT

S

S
TTTTT


TTS

TT
S


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LYLGAVAATVREGRSQDLASQAEESLYFQGESFAQLFEESLKEIETRIVRGVVVAIDKDVVLVDAGLKSE
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Known secondary structure (DSSP)
TTSSSS




TT




TT
SSSS
 .........290.........300.......
Sequence SAIPAEQFKNAQGELEIQVGDEVDVAL
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Known secondary structure (DSSP)
GGGGB
TTS
B


TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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