PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4sbvC_

Fold library id	PDB Header	Molecule	Title
c4sbvC_	PDB header: virus	Chain: C: PDB Molecule: southern bean mosaic virus coat protein;	PDBTitle: the refinement of southern bean mosaic virus in reciprocal2 space

Links to external resources
Added to library: Tue Mar 16 12:22:47 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q A G V S M A P I A Q G T M V K L R P P M L R S S M D V T I L S H C E L S T E L A V T V T I V V T S E L V M P F T V G T W L R G V A Q N W S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S S
S S
S
T T T T B S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K Y A W V A I R Y T Y L P S C P T T T S G A I H M G F Q Y D M A D T L P V S V N Q L S N L K G Y V T G P V W E G Q S G L C F V N N T K C P D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S T T S
S T T S T T
T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T S R A I T I A L D T N E V S E K R Y P F K T A T D Y A T A V G V N A N I G N I L V P A R L V T A M E G G S S K T A V N T G R L Y A S Y T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G
S S S S
T T T
S
S
S S

. . . . . . . . . 220 . .

Sequence R L I E P I A A A L N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	A	G	V	S	M	A	P	I	A	Q	G	T	M	V	K	L	R	P	P	M	L	R	S	S	M	D	V	T	I	L	S	H	C	E	L	S	T	E	L	A	V	T	V	T	I	V	V	T	S	E	L	V	M	P	F	T	V	G	T	W	L	R	G	V	A	Q	N	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						S																	S	S																	S	S									S						T	T						T	T	B	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	Y	A	W	V	A	I	R	Y	T	Y	L	P	S	C	P	T	T	T	S	G	A	I	H	M	G	F	Q	Y	D	M	A	D	T	L	P	V	S	V	N	Q	L	S	N	L	K	G	Y	V	T	G	P	V	W	E	G	Q	S	G	L	C	F	V	N	N	T	K	C	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S		T	T												S	T	T	S					S					T	T	S	T	T						T	T			T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	S	R	A	I	T	I	A	L	D	T	N	E	V	S	E	K	R	Y	P	F	K	T	A	T	D	Y	A	T	A	V	G	V	N	A	N	I	G	N	I	L	V	P	A	R	L	V	T	A	M	E	G	G	S	S	K	T	A	V	N	T	G	R	L	Y	A	S	Y	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								G	G	G		S	S	S	S																	T	T	T						S											S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	R	L	I	E	P	I	A	A	A	L	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	B			G	G	G