Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4s13D_

Fold library idPDB HeaderMoleculeTitle
c4s13D_PDB header: lyaseChain: D: PDB Molecule: ferulic acid decarboxylase 1;PDBTitle: ferulic acid decarboxylase (fdc1)


Added to library: Sat May 9 08:21:57 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLNPALEFRDFIQVLKDEDDLIEITEEIDPNLEVGAIMRKAYESHLPAPLFKNLKGASKDLFSILGCPAG
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


TTT
TT

S
B
TBTTT

S
BTT

SSS

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LRSKEKGDHGRIAHHLGLDPKTTIKEIIDYLLECKEKEPLPPITVPVSSAPCKTHILSEEKIHLQSLPTP
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)


GGG
TTTT

TT

GGGS






GGG
GGGS
GGG

GGGS


 .........150.........160.........170.........180.........190.........200.........210
Sequence YLHVSDGGKYLQTYGMWILQTPDKKWTNWSIARGMVVDDKHITGLVNEIPFALCFGVPPAAILVSSMPIP
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) B
STT
SS
SS
TTS





SSS



S

TTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence EGVSESDYVGAILGESVPVVKCETNDLMVPATSEMVFEGTLSLTDTHLEGPFGEMHGYVFKSHPCPLYTV
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) SS

SS


SSSS
TT
S





TTS





 .........290.........300.........310.........320.........330.........340.........350
Sequence KAMSYRDNAILPVSNPGLCTDETHTLIGSLVATEAKELAIESGLPILDAFMPYEAQALWLILKVDLKGLQ
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
TT




SSSSTT



GGGTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence ALKTTPEEFCKKVGDIYFRTKVGFIVHEIILVADDIDIFNFKEVIWAYVTRHTPVADQMAFDDVTSFPLA
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TT

TSGGGSS

TTS
TTSS
TTTT
SSB

TT
 .........430.........440.........450.........460.........470.........480
Sequence PFVSQSSRSKTMKGGKCVTNCIFRQQYERSFDYITCNFEKGYPKGLVDKVNENWKRYGYK
Predicted secondary structure








































SS confidence



























































Known secondary structure (DSSP) TSGGGGT
B

S
GGGGTS






SS
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D