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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4rykA_

Fold library idPDB HeaderMoleculeTitle
c4rykA_PDB header: dna binding proteinChain: A: PDB Molecule: lmo0325 protein;PDBTitle: crystal structure of a putative transcriptional regulator from2 listeria monocytogenes egd-e


Added to library: Sat Jan 10 08:09:38 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHHSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITLSLFEEILKRIXVPLDEFFFIYRDFS
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Known secondary structure (DSSP)



TT

TTTS
TT
S


T

TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence STEDDSFWIDFVELSGKNDVVGXQALLDKITLERTEQSEVRKAILHTRIQTINHYLRTNVSNISDEYKKI
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Known secondary structure (DSSP)
S
S

TT


TTS





 .........150.........160.........170.........180.........190.........200.........210
Sequence IHDYLWKXQTWTLEEVRIFSNGISFFEEEVQIHFYQIXLKSYEKYRYYDRGRLLFCHLFANLTDELIIQN
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Known secondary structure (DSSP) TT

S

GGGS
TTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KINYANLVLEKLKEASETSGSFNSAFYRIVANYYQGAIWXKEGEVEKGYRQAKRAIQTWKELHYEAIADL
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Known secondary structure (DSSP)
GGG
GGGTT
TT
 .........290.....
Sequence YSVVLKQFLEKENIQ
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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