PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4rxuA_

Fold library id	PDB Header	Molecule	Title
c4rxuA_	PDB header: transport protein	Chain: A: PDB Molecule: periplasmic sugar-binding protein;	PDBTitle: crystal structure of carbohydrate transporter solute binding protein2 caur_1924 from chloroflexus aurantiacus, target efi-511158, in3 complex with d-glucose

Links to external resources
Added to library: Sat Dec 27 08:54:20 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T Q Q L A V G I V L P T K D E P R W I Q D E T R F R E A L Q Q A G Y Q V E I L F S Q G S S A K E K E N V E A L I A K G I K V L I I C P H D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S T T
T T
T T
S
S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T A A A A A A E A A R A A G V K V I S Y D R L I R E T D A V D Y Y V T F D S I A V G A Q Q A Q Y L V D H A S G T G N P L Y L Y A G A A S D N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S S
S
S
T
S S
B
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N A F L F F E G A W K V L Q P K I A D G T F V I K N S S E A V A L Q N K L D L T R D E M A K I I G Q V T T N W D F N T A K N L A E A N L T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
T T T
S S
B
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A T A A D K G K V Y I L A P N D G T A R A I A D A F A A D K D V T E Y F V T G Q D A E K A S V Q Y I I D G R Q S M T V F K D V R T L V Q D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G
S T
T T
B S
T T S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340

Sequence I K A A V A L L Q D Q Q P E A R G T Y N N G K K D V P A I Q S P V V T V T R D N V R A A L I D S G Y Y S A S D F T N L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
T T T T T T S S S
G G G S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	Q	Q	L	A	V	G	I	V	L	P	T	K	D	E	P	R	W	I	Q	D	E	T	R	F	R	E	A	L	Q	Q	A	G	Y	Q	V	E	I	L	F	S	Q	G	S	S	A	K	E	K	E	N	V	E	A	L	I	A	K	G	I	K	V	L	I	I	C	P	H	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		S	S	S	T																	T									T	T															T	T		S							S	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	A	A	A	A	A	A	E	A	A	R	A	A	G	V	K	V	I	S	Y	D	R	L	I	R	E	T	D	A	V	D	Y	Y	V	T	F	D	S	I	A	V	G	A	Q	Q	A	Q	Y	L	V	D	H	A	S	G	T	G	N	P	L	Y	L	Y	A	G	A	A	S	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T										T	T							S	S				S		S																								T			S	S								B			T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	A	F	L	F	F	E	G	A	W	K	V	L	Q	P	K	I	A	D	G	T	F	V	I	K	N	S	S	E	A	V	A	L	Q	N	K	L	D	L	T	R	D	E	M	A	K	I	I	G	Q	V	T	T	N	W	D	F	N	T	A	K	N	L	A	E	A	N	L	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S					S							T	T	T		S	S														B		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	T	A	A	D	K	G	K	V	Y	I	L	A	P	N	D	G	T	A	R	A	I	A	D	A	F	A	A	D	K	D	V	T	E	Y	F	V	T	G	Q	D	A	E	K	A	S	V	Q	Y	I	I	D	G	R	Q	S	M	T	V	F	K	D	V	R	T	L	V	Q	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		G	G	G										S													T		T	T									B	S											T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Sequence	I	K	A	A	V	A	L	L	Q	D	Q	Q	P	E	A	R	G	T	Y	N	N	G	K	K	D	V	P	A	I	Q	S	P	V	V	T	V	T	R	D	N	V	R	A	A	L	I	D	S	G	Y	Y	S	A	S	D	F	T	N	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T							S					S	S															T	T	T						T	T	T	S	S	S		G	G	G	S	S	S