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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4rxhB_

Fold library idPDB HeaderMoleculeTitle
c4rxhB_PDB header: transport proteinChain: B: PDB Molecule: importin subunit alpha;PDBTitle: crystal structure of importin-alpha from neurospora crassa complexed2 with sv40nls


Added to library: Sat Jul 4 08:25:41 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLPKMVEGVFSSEIDKQIQATTKFRKLLSKERNPPIEEVIKTGVVGRFVEFLRSPHTLVQFEAAWALTNI
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Known secondary structure (DSSP)
TSS
T
SS


TT
TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASGSATQTQVVIEAGAVPIFVELLGSPEPDVREQAVWALGNIAGDSPQCRDYVLSCGALRPLLTLLGDSR
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Known secondary structure (DSSP) TTS
TTTT
S
TT
TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence KLSMLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLVYSLDDEVLIDACWAISYLSDGSNDKIQAVIE
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Known secondary structure (DSSP)



TT


TTTT
SSTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AGIPRRLVELLMHASTSVQTPALRSVGNIVTGDDVQTQVIINCGALPCLLSLLSSNKDGIRKEACWTISN
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Known secondary structure (DSSP) TTTT
S
TTS
TTTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ITAGNSAQIQSVIDANIIPPLIHLLSHADLKTRKEACWAISNATSGGLQKPDQIRYLVAQGCIKPLCDLL
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Known secondary structure (DSSP) TS
TT
SS
TTTTTTT
TTT
GG
 .........360.........370.........380.........390.........400.........410.........420
Sequence ACPDNKIIQVALDGLENILKVGELDKNAASINRYALFIEECGGMEKIHDCQTNANEEIYMKAYNIIEKYF
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Known secondary structure (DSSP) G
S
T



TTGGG

SSTT
 .
Sequence S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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