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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ru4E_

Fold library idPDB HeaderMoleculeTitle
c4ru4E_PDB header: structural proteinChain: E: PDB Molecule: tail spike protein gp49;PDBTitle: crystal structure of the tailspike protein gp49 from pseudomonas phage2 lka1


Added to library: Sat Nov 21 08:19:56 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRVTPAQFGAVGDGASHPLSERYATLAEAQTVYPHAVALSDEIDWAALQAAVDSGAPVHIPSGDYQINRG
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Known secondary structure (DSSP)

B
TGGGT


BSS

BGGGT
SS
TT


TTSBTTS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISSTGSLQIAGDGATSIIRPTAAFTGTSVLSCVGSLVALPNISSVSAGSLTIDFASTPNLVAGDVFIIYN
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Known secondary structure (DSSP) S
SSTT



B

B
TT

BSS

S

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence PTDSSFSGFRTSYRAGEFCEVRAVSGNTVTIRSALYAAYDGATVAIYKVVSGVVDIASIQIVGGTVPMNG
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Known secondary structure (DSSP)
STTSS
TT
TT


TTSS

SS
B
GGG



S

TTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLVEAVVSPRVDDVTVTLANNAGVYFARCYDAKITNSNISNIGDGGDDYGIIFGNCHDGGADNCKVYARR
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Known secondary structure (DSSP) S
BS
S
SSSS
S



SSS
S
S
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence HAIATGGDAEVGCVPVRNVRMRNCTLRNDITSGTHCADFHGNAEDCSYENCTIYGGATWQGKDISYRHCT
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Known secondary structure (DSSP)

SSTT


S
S

GGG
S
SB


TTS
TT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence ITNASGGWIVISAEILGGTFLLDQCTLYTTGDPQPGNRGVIDVGGNSAVLTTNTTQPCNFLIQGGSLRAP
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Known secondary structure (DSSP)

TTS
SS

SS

GGGT

SSSSS

BSTT

S
SST
 .........430.........440.........450.........460.........470.........480.........490
Sequence SLSTSSYLLRARLEGSTVPVNIQYSGQAIDVGSLGKVLQLDITSGSTSPEYLIVENLAGLPSGITLASAA
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Known secondary structure (DSSP) T

TT
S

S
S
SS

S



S
S
B


TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence GGFASAPMRMPVLGGRVQVTTATNASSVTAPVTFRYIYPKAPTVQVTKTDRSYAGNRVGVAIANPTSASG
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Known secondary structure (DSSP) GGGTTS


TT
S
SSB
SS

S
S
BTTB


SS
 .........570.........580.........590
Sequence ATLGLFTDDGTNFSSAVTNQLNWQAGIYEV
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Known secondary structure (DSSP)
TT



SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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