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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ru0B_

Fold library idPDB HeaderMoleculeTitle
c4ru0B_PDB header: transport proteinChain: B: PDB Molecule: putative branched-chain amino acid abc transporter,PDBTitle: the crystal structure of abc transporter permease from pseudomonas2 fluorescens group


Added to library: Sat Nov 29 08:21:32 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPDQQFFPLATYRVGAYASSGVQVWAGXIDYLNYINQVEGGINGVKLVWQECETEWTAEKGIECYERFKN
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Known secondary structure (DSSP)
TTS

SSTTTT
SBTTB

TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLDGAPVAVYQPNGAPAAYALSERAEVDKIPLITLGYGRTEATDGTVFPYNFPVXLTFYSEASTLVNYIA
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Known secondary structure (DSSP)
BTTB
BS
B


STT


TT
S
GGGG
TTT
TT

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence QREGGFDRLKGKKIATLYHDSAYGRETLGPLKLLAEKYGFENIQIPVADPGNEQSAQWRQIRQQNPDWVF
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Known secondary structure (DSSP) TSGGGGTT
SSTT


TT





S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRTWGVSTPVAVKTAARFGFPVDHIIGDIWASSSEDVLPAGAAAKGYLALTPYPAGSDFEIHKRLKQYIL
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Known secondary structure (DSSP)

TTTT

GGG
GGG
SGGGTGGGGGGGTT
SS


S
STTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DTGKSDLKDLKNFGSVYYNSGLVNAAVAVEAIRTAQGKFGKRPLNGEEGRWGLEHLNIDDARLKDXGYLG
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Known secondary structure (DSSP) TTT

S
S
GGGTTS
SS


T

T
TT
 .........360.........370.........380.........390.........400.........410.....
Sequence LXQNLKLSCRDHEGGGAARVQQWDGANWTLISEWIAADRALLRPLIDEKAAAFAKEKRLVPRTCN
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Known secondary structure (DSSP) TS



SS
S




SS






TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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