Fold library entry viewer: c4rrpB_

Added to library: Sat Jan 3 08:36:51 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	D	I	Q	M	T	Q	S	P	S	S	L	S	A	S	V	G	D	R	V	T	I	T	C	R	A	S	Q	S	V	S	S	A	V	A	W	Y	Q	Q	K	P	G	K	A	P	K	L	L	I	Y	S	A	S	S	L	Y	S	G	V	P	S	R	F	S	G	S	R	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S						T	T										S	S			S	S									T	T	S								T	T	T				T	T			T	T							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	D	F	T	L	T	I	S	S	L	Q	P	E	D	F	A	T	Y	Y	C	Q	Q	S	Q	W	Y	P	I	T	F	G	Q	G	T	K	V	E	I	K	R	T	V	A	A	P	S	V	F	I	F	P	P	S	D	S	Q	L	K	S	G	T	A	S	V	V	C	L	L	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							S	S			G	G	G		S								S	B	S	S																B																	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	Y	P	R	E	A	K	V	Q	W	K	V	D	N	A	L	Q	S	G	N	S	Q	E	S	V	T	E	Q	D	S	K	D	S	T	Y	S	L	S	S	T	L	T	L	S	K	A	D	Y	E	K	H	K	V	Y	A	C	E	V	T	H	Q	G	L	S	S	P	V	T	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S	S									T	T					S	S										T	T	T																		T											T	T	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	N	R	G	E	C	E	V	Q	L	V	E	S	G	G	G	L	V	Q	P	G	G	S	L	R	L	S	C	A	A	S	G	F	N	V	S	Y	S	S	I	H	W	V	R	Q	A	P	G	K	G	L	E	W	V	A	Y	I	Y	P	S	S	G	Y	T	S	Y	A	D	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																T	T											S	S		G	G	G	S									T	T	S										T	T	T							T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	G	R	F	T	I	S	A	D	T	S	K	N	T	A	Y	L	Q	M	N	S	L	R	A	E	D	T	A	V	Y	Y	C	A	R	S	Y	S	T	K	L	A	M	D	Y	W	G	Q	G	T	L	V	T	V	S	S	A	S	T	K	G	P	S	V	F	P	L	A	P	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T							T	T	T	T								S			G	G	G										S	S	S	T	T															S	S			B											S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	S	T	S	G	G	T	A	A	L	G	C	L	V	K	D	Y	F	P	E	P	V	T	V	S	W	N	S	G	A	L	T	S	G	V	H	T	F	P	A	V	L	Q	S	S	G	L	Y	S	L	S	S	V	V	T	V	P	S	S	S	L	G	T	Q	T	Y	I	C	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T	S												B	S	S							G	G	G	T	B		T	T										T	T	S												G	G	G	T	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	H	K	P	S	N	T	K	V	D	K	K	V	E	P	K	S	S	S	I	V	S	L	L	G	I	K	V	L	N	N	P	A	K	F	T	D	P	Y	E	F	E	I	T	F	E	C	L	E	S	L	K	H	D	L	E	W	K	L	T	Y	V	G	S	L	D	H	D	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T														S										S		S			T	T	S												S			S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	D	S	I	L	V	G	P	V	P	V	G	V	N	K	F	V	F	S	A	D	P	P	S	A	E	L	I	P	A	S	E	L	V	S	V	T	V	I	L	L	S	C	S	Y	D	G	R	E	F	V	R	V	G	Y	Y	V	N	N	E	Y	D	E	E	E	L	R	E	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			S														S	T	T	S		T	T	G	G	G	S											T	T															S	S						S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Sequence	P	A	K	V	Q	V	D	H	I	V	R	N	I	L	A	E	K	P	R	V	T	R	F	N	I	V	W	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			G	G	G								S	S										S

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PDB structure

FASTA sequence

Hidden Markov model

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