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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ro1B_

Fold library idPDB HeaderMoleculeTitle
c4ro1B_PDB header: hydrolaseChain: B: PDB Molecule: dis3-like exonuclease 2;PDBTitle: an 3'-5'-exoribonuclease that specifically recognizes rnas.


Added to library: Sat Jun 13 08:30:00 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSYAIFIPKDKRLPFITIHKNDLSDLSGENWIENILKHHDQLFSVEITRWSIYSRWPMGVLGEKLGNITD
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Known secondary structure (DSSP)



SSTTS

TTSSSSS
STTTTTTTT





TT
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence VEAYTNALLLENGISSSPFSDEVLNCLPPDDWIISHEEIKKRRDLRNELIITIDPETARDLDDAVSCRAL
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Known secondary structure (DSSP) TT






TTTTTSS

TT



TS
TTS

SS
S



 .........150.........160.........170.........180.........190.........200.........210
Sequence DNGTYEVGVHIADVTHFVKPDSALDKEAASRATTVYLVQKAIPMLPPLLCERLCSLNPNVERLAFSVFWK
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Known secondary structure (DSSP) SSS
GGGTS
TTS
B

SS

SS
TTTT


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDSNGKEIGKRWFGKTVIKTCARLAYSEAQGVIEGKSWDDAVGKPIGGTHTPKDVETSILTLCEISRKLR
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Known secondary structure (DSSP) TTS


S




T







TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence KDRFAKGAVEINSTELKFQLDEYGMPNKCEVYEQTDANHLIEEFMLLANRSVAEHISKNFSNNSLLRRHA
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Known secondary structure (DSSP) T








TTS




TTT
SSS
B
 .........360.........370.........380.........390.........400.........410.........420
Sequence SPKEKQINEFCHFLKSMNFDFDASSSAAFNASMVRLRSTFNEELVELFENMAVRSLNRAEYFCTGDFGEK
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Known secondary structure (DSSP)


TTTTTS




SSTTTS
S


GGGT

G
 .........430.........440.........450.........460.........470.........480.........490
Sequence TDWHHYALSFNHYTHFTSPIRRYPDIIVHRLLERSLKNTSPGIDKKNCSLVAAHCNEKKEKSTTVQEDSQ
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Known secondary structure (DSSP) GGS
BTTTTBSS



S
TTTBSTTTT


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QLFLSVYIAEYCKKHDKKSMPVQAFATRISGNSIDVYISEYGISNRVDSQKTIALTDRFQVYLYSDYSRT
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Known secondary structure (DSSP) TTS
S



S

SS
TGGG






TT





SS
 ........
Sequence FFSIRCSL
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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