PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4rnsA_

Fold library id	PDB Header	Molecule	Title
c4rnsA_	PDB header: transcription	Chain: A: PDB Molecule: pcp degradation transcriptional activation protein;	PDBTitle: pcpr inducer binding domain (apo-form)

Links to external resources
Added to library: Sat Nov 29 09:30:10 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R F D P G T S N R N F R I A A S D F G Q A L M L P R L Y A T L E E T A P Q V R V T G V N L R H G P L V E E L E S G S I D I A F G G F P T L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
G G G G
T T
S S
T S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A G I K T Q T L F R E E Y V C V M R Q S H P A L T H G L D L E A F R Q C R H I I V T A H E F N H V H E Q V E A R L L E L L P P E S I R F T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
G G G S S
S
G G G T
T T S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E N F L V S A V I A E E T D V I L T I P S R L A R W F A N R G G L T I F P V P I E L P S I E V K Q Y W H E R Y D K D P G N I W L R R V I A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T T S
S S
G G G T T
T

. . . .

Sequence I G F Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	F	D	P	G	T	S	N	R	N	F	R	I	A	A	S	D	F	G	Q	A	L	M	L	P	R	L	Y	A	T	L	E	E	T	A	P	Q	V	R	V	T	G	V	N	L	R	H	G	P	L	V	E	E	L	E	S	G	S	I	D	I	A	F	G	G	F	P	T	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T																		G	G	G	G									T	T										S	S									T	S		S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	I	K	T	Q	T	L	F	R	E	E	Y	V	C	V	M	R	Q	S	H	P	A	L	T	H	G	L	D	L	E	A	F	R	Q	C	R	H	I	I	V	T	A	H	E	F	N	H	V	H	E	Q	V	E	A	R	L	L	E	L	L	P	P	E	S	I	R	F	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																	T	T		G	G	G	S	S										S								G	G	G	T		T	T											S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	N	F	L	V	S	A	V	I	A	E	E	T	D	V	I	L	T	I	P	S	R	L	A	R	W	F	A	N	R	G	G	L	T	I	F	P	V	P	I	E	L	P	S	I	E	V	K	Q	Y	W	H	E	R	Y	D	K	D	P	G	N	I	W	L	R	R	V	I	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	S															T	T	T	S							S	S													G	G	G	T	T													T
	.	.	.	.
Sequence	I	G	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)