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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4rnhA_

Fold library idPDB HeaderMoleculeTitle
c4rnhA_PDB header: transferase, hydrolaseChain: A: PDB Molecule: motility regulator;PDBTitle: pamora tandem diguanylate cyclase - phosphodiesterase, c-di-gmp2 complex


Added to library: Sat Nov 22 14:19:02 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFLGHAAGDRMLQEVATRLSACVSQDDT
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Known secondary structure (DSSP)
TTB
TTT

B
T




S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLM
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Known secondary structure (DSSP) TTSSS
B

TTS
B

TTT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALL
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Known secondary structure (DSSP) T
SSSSTT
TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGER
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Known secondary structure (DSSP) TTT
TTTTT







TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKI
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Known secondary structure (DSSP) T

GGGTTTT
TSS


S


 .........360.........370.........380.........390.........400.........410.........420
Sequence DRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGM
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Known secondary structure (DSSP)
TTTT
TT




STT


SGGG


B
 ...
Sequence LYA
Predicted secondary structure

SS confidence


Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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