Fold library entry viewer: c4rm6A_

Added to library: Sat May 21 09:03:02 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	R	D	L	P	Q	G	S	S	V	V	V	G	E	A	N	V	S	T	I	G	N	K	M	T	I	D	Q	K	T	P	T	T	Q	I	D	W	H	S	F	D	I	G	Q	N	K	E	V	E	F	K	Q	P	D	A	N	S	V	A	Y	N	R	V	T	G	G	N	A	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		B	S						S								T	T								S	S							S	B			B		T	T								S	S	T	T									S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	Q	G	K	L	T	A	N	G	K	V	Y	L	A	N	P	N	G	V	I	I	T	Q	G	A	E	I	N	V	A	G	L	F	A	T	T	K	D	L	E	R	I	S	E	N	N	K	F	T	R	K	L	K	D	G	Q	V	V	K	E	G	Q	V	I	N	K	G	K	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					S	S							T	T						T	T						S						S	S	B		S	S						B		B				B	T	T	B											S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	D	F	V	V	L	N	G	D	K	V	I	N	E	G	E	I	D	A	T	N	N	G	K	V	Y	L	S	S	G	Y	N	F	T	F	T	L	S	D	S	S	I	S	V	A	L	E	D	N	A	V	Q	S	I	V	Q	N	E	G	I	I	K	A	G	D	I	T	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S						S	S						S						T	T								S							S	S								S	S				S								S					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	K	G	R	N	Q	A	L	D	S	L	V	M	N	N	G	V	L	E	A	T	K	V	S	N	K	N	G	K	V	V	L	S	A	D	D	V	Q	L	N	N	K	S	D	I	K	G	E	S	E	V	V	F	T	N	E	N	K	I	K	I	T	S	Q	T	G	S	K	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	T	T	B								S								T	T									S	S						T	T						S	S																T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	P	K	I	N	F	T	G	K	S	V	N	I	N	G	D	F	G	R	D	D	S	K	A	H	Y	N	E	E	H	K	R	L	D	T	E	V	N	I	D	V	P	D	N	E	N	I	R	I	A	E	K	D	N	T	D	S	F	I	Q	T	G	A	L	S	S	L	L	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						S	S									B			S	S		T	T			T	T	T	T												T	T							S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	G	K	V	N	L	K	G	K	D	V	N	I	S	G	R	I	H	I	D	S	F	R	G	S	D	S	L	L	K	L	T	N	Q	G	H	I	K	I	N	H	A	D	I	H	S	T	G	R	L	F	F	I	T	S	L	Q	N	E	K	D	S	Q	S	D	I	T	I	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						S	S													G	G	G										S	S												S	S											S	S	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	K	I	N	L	G	N	G	A	M	G	L	G	R	S	L	D	K	E	N	C	D	N	Q	R	W	C	R	T	E	T	S	Q	R	K	K	F	D	V	H	M	R	N	V	V	F	D	Q	V	D	D	V	V	V	A	G	G	F	K	K	V	N	L	D	N	I	V	A	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		G	G	G	B	S		S	S	S			S	B	S	S																								S	S													T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	T	N	F	Y	I	D	G	G	V	S	R	N	N	S	R	Y	E	Y	G	V	L	D	L	D	K	R	T	L	L	S	E	L	D	Q	R	R	R	R	W	K	Y	Y	N	D	L	D	L	D	M	N	K	A	Y	W	H	R	F	D	M	R	S	T	I	K	D	T	E	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											S	S	S	S		B	B		S		S							T		B		S			S	S		S	B				T	T									T	G	G	G	S							T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	S	N	S	K	I	N	L	K	N	G	F	V	H	L	L	A	E	K	I	K	L	D	N	S	K	I	D	I	T	F	D	K	D	N	S	Q	D	I	S	T	Q	I	N	R	L	G	M	N	G	K	V	S	M	V	N	S	H	I	K	I	V	G	D	E	K	S	D	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							S														S												T	T		G	G	G	S	S		S											S									S		T	T		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	K	A	P	Y	A	T	M	F	L	I	G	E	L	I	G	E	K	S	S	I	F	V	K	S	H	Q	G	Y	T	F	R	T	D	G	D	T	K	I	A	G	K	N	S	K	D	D	L	K	I	T	A	I	N	T	G	G	R	T	G	K	E	V	I	I	N	G	A	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S													S								S	S	S							T	T						S	S	S	G	G	G											S		S							S		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	I	A	N	M	A	F	T	I	G	D	N	A	N	T	K	T	T	I	E	N	A	D	I	T	A	L	A	P	N	G	G	T	A	Y	L	S	S	K	G	V	E	I	E	V	N	P	N	S	N	F	T	F	F	E	L	P	I	K	G	D	S	T	K	L	S	E	R	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S							S								T	T	S								T	T							T	T	S										B	S
	.	.	.	.	.	.	.	.	.	780	.
Sequence	A	R	L	Y	D	K	I	N	G	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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