Fold library entry viewer: c4rlvA_

Added to library: Sat Nov 29 09:29:04 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	V	A	V	I	D	A	I	P	L	A	A	T	E	H	D	T	X	L	E	X	S	D	X	Q	V	W	S	A	G	L	T	P	S	L	V	T	A	E	D	S	G	S	L	V	P	R	G	S	K	S	D	S	N	A	S	F	L	R	A	A	R	A	G	N	L	D	K	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			T											T	T	T	S						G	G	G	T	S																	T	T														T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	Y	L	K	G	G	I	D	I	N	T	C	N	Q	N	G	L	N	A	L	H	L	A	A	K	E	G	H	V	G	L	V	Q	E	L	L	G	R	G	S	S	V	D	S	A	T	K	K	G	N	T	A	L	H	I	A	S	L	A	G	Q	A	E	V	V	K	V	L	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			T	T				T	T												T											T	T			T	T				T	T												T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	G	A	N	I	N	A	Q	S	Q	N	G	F	T	P	L	Y	X	A	A	Q	E	N	H	I	D	V	V	K	Y	L	L	E	N	G	A	N	Q	S	T	A	T	E	D	G	F	T	P	L	A	V	A	L	Q	Q	G	H	N	Q	A	V	A	I	L	L	E	N	D	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			T	T				T	T											T	T											T	T			T	T				T	T	S										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	K	V	R	L	P	A	L	H	I	A	A	R	K	D	D	T	K	S	A	A	L	L	L	Q	N	D	H	N	A	D	V	Q	S	K	X	X	V	N	R	T	T	E	S	G	F	T	P	L	H	I	A	A	H	Y	G	N	V	N	V	A	T	L	L	L	N	R	G	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T									T	S	S					S		G	G	G	S	G	G	G				T	T	S											T											T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	D	F	T	A	R	N	G	I	T	P	L	H	V	A	S	K	R	G	N	T	N	X	V	K	L	L	L	D	R	G	G	Q	I	D	A	K	T	R	D	G	L	T	P	L	H	C	A	A	R	S	G	H	D	Q	V	V	E	L	L	L	E	R	G	A	P	L	L	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			B	T	T	T	B										T											T	T			T	T				T	T												T											T	T			T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	K	N	G	L	S	P	L	H	X	A	A	Q	G	D	H	V	E	C	V	K	H	L	L	Q	H	K	A	P	V	D	D	V	T	L	D	Y	L	T	A	L	H	V	A	A	H	C	G	H	Y	R	V	T	K	L	L	L	D	K	R	A	N	P	N	A	R	A	L	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											T	T											T	T			T	T				T	T											T	T											T	T			T	T				T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	T	P	L	H	I	A	C	K	K	N	R	I	K	V	X	E	L	L	V	K	Y	G	A	S	I	Q	A	I	T	E	S	G	L	T	P	I	H	V	A	A	F	X	G	H	L	N	I	V	L	L	L	L	Q	N	G	A	S	P	D	V	T	N	I	R	G	E	T	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T											T	T			T	T				T	T												T											T	T			T	T				T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	X	A	A	R	A	G	Q	V	E	V	V	R	C	L	L	R	N	G	A	L	V	D	A	R	A	R	E	E	Q	T	P	L	H	I	A	S	R	L	G	K	T	E	I	V	Q	L	L	L	Q	H	X	A	H	P	D	A	A	T	T	N	G	Y	T	P	L	H	I	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T											T	T			T	T				G	G	G											T											T	T			T	T				T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	E	G	Q	V	D	V	A	S	V	L	L	E	A	G	A	A	H	S	L	A	T	K	K	G	F	T	P	L	H	V	A	A	K	Y	G	S	L	D	V	A	K	L	L	L	Q	R	R	A	A	A	D	S	A	G	K	N	G	L	T	P	L	H	V	A	A	H	Y	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T										T	T	T			T	T				T	T												T										T	T	T			T	T				T	T											T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	K	V	A	L	L	L	L	E	K	G	A	S	P	H	A	T	A	K	N	G	Y	T	P	L	H	I	A	A	K	K	N	Q	X	Q	I	A	S	T	L	L	N	Y	G	A	E	T	N	I	V	T	K	Q	G	V	T	P	L	H	L	A	S	Q	E	G	H	T	D	X	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			T	T				S	S											T	T											T	T			S	S				T	T											T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	L	L	L	D	K	G	A	N	I	H	X	S	T	K	S	G	L	T	S	L	H	L	A	A	Q	E	D	K	V	N	V	A	D	I	L	T	K	H	G	A	D	Q	D	A	H	T	K	L	G	Y	T	P	L	I	V	A	C	H	Y	G	N	V	K	X	V	N	F	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T				T	T				S	S	S										T	T									T	T	T	T			S	S				S	S											T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.
Sequence	K	Q	G	A	N	V	N	A	K	T	K	N	G	Y	T	P	L	H	Q	A	A	Q	Q	G	H	T	H	I	I	N	V	L	L	Q	H	G	A	K	P	N	A	T	T	A	N	G	N	T	A	L	A	I	A	K	R	L	G	Y	I	S	V	V	D	T	L	K	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T			T	T				S	S	S							T	T	T	T	T									T	T	T	T			S					S	S								T	T	T	T	T		T	T	T	T	T	T	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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