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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4rgkA_

Fold library idPDB HeaderMoleculeTitle
c4rgkA_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of putative phytanoyl-coa dioxygenase family protein2 ybiu from yersinia pestis


Added to library: Sat Jan 3 08:11:36 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NAXASLHIDDIPAAIKAVKQQLRQALPDYQQVFQAVEENIRQQVXEIRRNLAEGKNPVPQLHADDIINGK
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Known secondary structure (DSSP)
TTTTS
TTTSTTTT

SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VTEEQKAQIKQRGCCAILGVFPQEKATAWNREIGDYLDRNNFVERLKNAAEDNYFGTLAASKPQIYGIYW
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Known secondary structure (DSSP)

TTSS
TTSS
SSTTSSS
S



 .........150.........160.........170.........180.........190.........200.........210
Sequence STPQVEARQDKRXQAVQIFLNNLWQTESNGKQHFDANRVVTYADRTRRRPPKSSSLGLSPHVDGGSIERW
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Known secondary structure (DSSP)

TTSB
TTSS






TT





SSSS
ST
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDENFRHVYRHVFSGQWQKYDPFAAEGRPEVREFPSPAVCSXFRTFQGWTALTPQRTHAGTLNVIPIANA
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Known secondary structure (DSSP)
TTS
GGG

TTB
TTGGG




STT

SS

SSS
B
TTBT



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence XAYILLRALQDDVADDDLCGAAPGRALSASEQWHPLLXEAISPIPDLEAGDTVFWHCDVIHSVENEHNGE
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Known secondary structure (DSSP) TTSTTS
TT
STT

TTS


TTT
TT



B
TT
TT


S
B
SS
 .........360.........370.........380.........390.........400.........410......
Sequence FDSNVXYIAAAPWCEKNAAYLPRQLASFIDGRSPPDFAADDFEVDFIGRATIKNLTEIGKQQLGIT
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Known secondary structure (DSSP) S


B

T


TTS



GGGG
TT


GGG

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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