Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4rg8A_

Fold library idPDB HeaderMoleculeTitle
c4rg8A_PDB header: hydrolaseChain: A: PDB Molecule: exonuclease i;PDBTitle: structural and biochemical studies of a moderately thermophilic2 exonuclease i from methylocaldum szegediense


Added to library: Sat Feb 28 08:18:27 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CCSLYWYDYETFGTDPRRDRPAQFAGIRTDLELNPIGEPVTLFCKPARDVLPVPEACLITGITPQMAAER
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

SSS
TTTS

TTS
B
S

B


TT






 .........80.........90.........100.........110.........120.........130.........140
Sequence GLKEAEFITRIHEQFSVPGTCVAGYNNIRFDDEVTRHCLYRNLFDPYEREWRNGNSRWDIIDMLRLTRAL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
B
TSTT
SS
TTTTTS
SSGGG


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RPEGIEWPVDGSGKPSLRLEALTVANGIQHAHDALADVRATIAVARLVRERQPKLFNFVFANRGKREAFE
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)

TTS


B
TTS
B


TT




S
T
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLRFGAMQPVLHVSEKYASDRYCLAVVVALARHPRNPNGVVVYDLSVDPTPLIDLNAEDLRERLFTPASK
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TTTTT


TTS
GGGTT
SS
TTTTS

S
S
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPPGVERIALKTVHLNKCPVIAPLTALRSQDTERLQIDLDRCNRHLDRLKREWTLPKKIREAMTTDDPDL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S
TT




GGG

GGG

TT

T
TTT



GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence MLYDGFLGDADRAVLKWLRGLTPDELARAQPSFEDARLPELLFRYRARNFPETLTPEETARWEAYRIRRL
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
GGG



S





SSTT
GGGS
 .........430.........440.........450.........460.......
Sequence TVEGCGGSIVLNEYLARIEALEASPDLSAKDREILKNLREYAREIIS
Predicted secondary structure















SS confidence














































Known secondary structure (DSSP) STTSS
SS
T
S


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D