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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4repA_

Fold library idPDB HeaderMoleculeTitle
c4repA_PDB header: oxidoreductase, flavoproteinChain: A: PDB Molecule: gamma-carotene desaturase;PDBTitle: crystal structure of gamma-carotenoid desaturase


Added to library: Sat Jul 18 08:51:46 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKNAIVIGAGIGGLAAALRLRHQGYSVTIFEKNDYAGGKLHAIEKDGYRFDLGPSLFTLPHLVENLFALF
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Known secondary structure (DSSP)



BTT

SSSSSBTTS
TT
S


B

TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PEEIIDFGYKSKAISFHYFWDDGTLFKASTDSSQFIEDASKVFKEEKSTIKKYLAKSKSKYELTKSLFLE
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Known secondary structure (DSSP) TTS





S
TTS
SST

TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KSLHKATTYFSLDTVKAIVHAPFLGLNNTLNDENSKFKNPKLTQLFNRYATYNGSSPYQTPGIMTMIPHL
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Known secondary structure (DSSP)






SS




TTTSBTTSSSGGGGGGT

TTTSBGGGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELGLGTYYPDGGMHRISQSLFELAQKVGVKFRFRESVTNITTSKNKVTGVETKNGSYLSDLVVSNMDIVP
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Known secondary structure (DSSP) TS

TT
TTT

S

TTTT
S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TYRNLMKDVPAPEKTLSQERSSSALIFYWGIDREFPELDLHNILFSEDYKTEFEHIFEHKTLAQDPTVYI
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Known secondary structure (DSSP) TT
TTS


S
B

SS

TT

S

S
TSS

SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence NITSKESSNDAPAGHENWFVMINAPGDYGQDWEQLVEESKKQIIAKIKKCLHVDISKHITTEYILTPQGI
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Known secondary structure (DSSP) GGGT
GGGSSTT



SS


S
GGGT
 .........430.........440.........450.........460.........470.........480.........
Sequence EKNTSSYRGALYGAASNNKFAAFLRHPNFNGKIKNLYHVGGSVHPGGGIPLCLLSAQITADLIQKEQLE
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Known secondary structure (DSSP)

GGG
SSSB


SSSGGGGS

SB
SSSBT
STTSSS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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