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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4rdqA_

Fold library idPDB HeaderMoleculeTitle
c4rdqA_PDB header: transport proteinChain: A: PDB Molecule: bestrophin-1;PDBTitle: calcium-activated chloride channel bestrophin-1, from chicken, in2 complex with fab antibody fragments, chloride and calcium


Added to library: Sat Oct 25 09:20:23 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVTYTNRVADARLGTFSQLLLQWKGSIYKLLYSEFLIFISLYFAISLVYRLILSESQRLMFEKLALYCNS
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Known secondary structure (DSSP)



TTTTSS

TTTTGGGGG

TT
TS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence YAELIPVSFVLGFYVSLVVSRWWAQYESIPWPDRIMNLVSCNVDGEDEYGRLLRRTLMRYSNLCSVLILR
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Known secondary structure (DSSP) T

TTS

TS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SVSTAVYKRFPSMEHVVRAGLMTPEEHKKFESLNSPHNKFWIPCVWFSNLAVKARNEGRIRDSVLLQGIL
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Known secondary structure (DSSP)
TTSSSTTSS
S

SS
GGGTTSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence NELNTLRSQCGRLYGYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLDPEKAYPGHELDLFVPVFTFLQF
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Known secondary structure (DSSP) S
S
TS


TTTTBTTB



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNLQVSLMAVDEMHQDLPILEKDLYWNEPDPQPPYTAAT
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Known secondary structure (DSSP) TSTTSSSTTS

TTTTT







TTTT
SS





GGG
 .........360......
Sequence AEYKRPSFLGSTFDIS
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Known secondary structure (DSSP) GGG






TTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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