Fold library entry viewer: c4rcnA_

Added to library: Sat Nov 8 08:35:21 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	L	L	V	A	N	R	G	E	I	A	L	R	I	I	R	T	A	T	E	L	G	M	R	T	V	A	V	Y	A	A	D	D	A	H	S	P	H	V	H	A	A	D	E	A	M	P	L	P	G	S	G	P	P	A	Y	L	N	Q	A	A	L	L	A	V	A	E	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T									S	T	T	T	T							S	S						S	S		S	G	G	G	G	G												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	A	T	L	I	H	P	G	Y	G	F	L	S	E	N	A	E	F	A	K	A	C	A	A	A	S	H	T	F	V	G	P	D	G	R	V	L	E	L	L	G	N	K	T	A	A	R	R	A	A	I	A	A	G	V	P	T	L	A	A	L	L	G	D	A	R	H	I	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S						S	S	T	T	T	T											T	T				S	S	S																					T	T			B						S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	V	V	A	A	P	A	G	H	Q	T	H	A	L	A	V	G	D	R	D	C	S	M	Q	R	R	Y	Q	K	L	I	E	I	A	P	A	Q	G	L	S	E	E	L	R	R	A	L	H	Q	A	A	V	R	L	C	A	R	V	G	L	R	G	L	A	T	V	E	F	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T																	T	T								S		S	S																				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	G	E	R	F	V	F	L	E	V	N	P	R	I	Q	V	E	H	T	V	T	E	Q	T	T	G	L	D	L	V	A	V	Q	L	A	I	A	G	G	E	S	Y	Y	R	L	G	L	P	A	G	I	A	S	D	G	T	E	V	I	G	E	P	A	A	Q	R	G	I	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T										S			T	T																					T	T			G	G	G	G										S	S	S										S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	L	R	V	N	A	E	T	F	G	A	D	F	S	V	L	P	S	A	G	T	L	T	A	F	C	P	P	S	G	P	G	V	R	V	D	T	Y	G	R	P	G	L	V	V	S	P	Q	Y	D	S	L	L	A	K	V	I	V	A	V	H	G	S	S	W	R	A	A	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S					T	T	S										S							S	T	T									T	T					T	T	S												S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	A	D	T	A	L	S	E	F	G	V	E	G	V	A	T	N	I	G	F	L	R	R	L	L	A	E	Q	R	L	E	T	G	W	V	N	T	D	F	V	D	E	K	L	P	E	L	A	A	A	A	P	G	A	V	E	L	Y	P	G	E	D	A	L	R	A	Q	L	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T					S	S			S								T	T		S	G	G	G	G	S				T	T					S						S										T	T							S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	V	V	E	V	A	P	E	G	A	D	Y	P	A	G	A	Q	L	V	V	L	E	A	M	K	M	Q	H	V	L	A	A	P	D	A	L	R	T	V	R	V	L	V	T	P	G	Q	V	V	G	T	G	D	P	L	L	V	F	T	R	T	D	L	D	L	T	R	A	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S					T	T									S	S	S							S	S	S										T	T					T	T											T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	E	V	I	E	R	H	A	R	T	L	D	E	G	R	P	D	A	V	A	K	R	H	R	Q	G	R	R	T	A	R	E	N	I	D	D	L	V	D	P	G	S	F	V	E	Y	G	A	L	A	I	A	A	Q	R	S	R	R	S	E	E	D	L	I	A	N	T	P	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S	S	T	T											T	T												S		T	T						S	T	T				S		S	S	S	S									S	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	L	V	A	G	L	A	T	V	G	A	D	R	F	G	P	A	A	A	Q	A	V	V	A	S	Y	D	Y	T	V	L	A	G	T	Q	G	M	R	N	H	A	K	T	D	R	V	F	D	L	A	A	R	K	R	L	P	V	V	L	F	A	E	G	G	R	P	G	D	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G								S	S	T	T	T	S		T	T	T	T									T	T	T	G	G	G																				T	T									B			T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	A	G	L	D	V	P	T	F	R	M	L	A	G	L	R	G	R	V	P	L	V	S	V	V	S	G	R	C	F	A	G	N	A	A	L	A	G	V	C	D	V	I	I	A	T	P	D	A	N	I	G	M	G	G	P	A	M	I	E	G	G	G	L	G	V	Y	P	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T									T	T	T	T	T	S								S				T							T	T	S	S						T	T					S	S								T	T	S					G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	I	G	P	I	A	V	Q	R	R	N	G	V	V	G	L	V	A	R	D	E	A	H	A	V	S	L	A	K	Q	Y	L	S	Y	F	Q	G	R	L	D	R	W	Q	A	P	D	P	R	V	A	R	H	V	V	P	Q	N	R	L	R	A	Y	D	V	H	R	A	I	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	S	B	T	T					T	T			S				S	S															T	T				S												T	T	S		S	S	T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	I	V	D	V	G	S	V	L	E	L	R	P	D	Y	G	V	G	I	V	T	A	L	V	R	V	E	G	V	P	Y	G	L	I	A	N	S	T	H	H	L	G	G	A	I	D	A	E	A	A	D	K	A	G	D	F	L	A	L	C	E	S	F	G	L	P	V	I	S	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T						S	T	T	S	S	T	T									T	T														T	T		B																		T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	D	T	P	G	F	M	V	G	P	D	A	E	T	Q	A	A	V	R	R	F	G	R	M	F	V	L	G	A	R	L	T	V	P	L	G	M	I	I	L	R	K	G	Y	G	L	G	A	M	A	M	A	G	G	S	F	R	A	P	Q	F	T	V	A	W	P	T	G	E	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		B			S						T	T														T			S																		T	T	T	S	S	T	T	S	S	S						T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.
Sequence	G	M	G	L	E	S	A	V	R	L	G	Y	R	T	D	P	A	E	R	Q	N	L	F	D	R	L	V	A	A	A	Y	Q	H	G	K	A	L	R	A	A	T	T	F	E	L	D	D	V	I	D	P	A	A	S	R	A	W	I	T	R	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														S	S														G	G	G	G	B							T	T	S	S	S					G	G	G							T	T

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PDB structure

FASTA sequence

Hidden Markov model

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