PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4rc1B_

Fold library id	PDB Header	Molecule	Title
c4rc1B_	PDB header: unknown function	Chain: B: PDB Molecule: upf0264 protein mj1099;	PDBTitle: structure of the methanofuran/methanopterin biosynthetic enzyme mj10992 from methanocaldococcus jannaschii with prpp

Links to external resources
Added to library: Sat Nov 15 08:11:35 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M H H H H H H M I L L V S P I D V E E A K E A I A G G A D I I D V K N P K E G S L G A N F P W M I K A I R E V T P K D L L V S A T V G D V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
S
G G G
T T
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y K P G T I S L A A V G A A I S G A D Y I K V G L Y G V K N Y Y Q A V E L M K N V V R A V K D I D E N K I V V A A G Y A D A Y R V G A V E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S
S
S
T T S T T G G G T T
G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L I V P K I A R D A G C D V A M L D T A I K D G K T L F D F Q S K E I L A E F V D E A H S Y G L K C A L A G S I K K E H I P I L K E I G T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T
S
S S
S S
S
T T
S S
G G G T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence I V G V R G A A C K G G D R N N G R I D R E L V K E L K E L C K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G B T T S
T T T
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	H	H	H	H	H	H	M	I	L	L	V	S	P	I	D	V	E	E	A	K	E	A	I	A	G	G	A	D	I	I	D	V	K	N	P	K	E	G	S	L	G	A	N	F	P	W	M	I	K	A	I	R	E	V	T	P	K	D	L	L	V	S	A	T	V	G	D	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S											T		S							G	G	G		T	T															S		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	K	P	G	T	I	S	L	A	A	V	G	A	A	I	S	G	A	D	Y	I	K	V	G	L	Y	G	V	K	N	Y	Y	Q	A	V	E	L	M	K	N	V	V	R	A	V	K	D	I	D	E	N	K	I	V	V	A	A	G	Y	A	D	A	Y	R	V	G	A	V	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T		S								S			S																				T	T	S								T	T	G	G	G	T	T				G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	I	V	P	K	I	A	R	D	A	G	C	D	V	A	M	L	D	T	A	I	K	D	G	K	T	L	F	D	F	Q	S	K	E	I	L	A	E	F	V	D	E	A	H	S	Y	G	L	K	C	A	L	A	G	S	I	K	K	E	H	I	P	I	L	K	E	I	G	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G									T		S							S	S		S	S							S															T	T							S	S			G	G	G							T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	I	V	G	V	R	G	A	A	C	K	G	G	D	R	N	N	G	R	I	D	R	E	L	V	K	E	L	K	E	L	C	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	G	G	G	B	T	T	S		T	T	T			B