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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4raaA_

Fold library idPDB HeaderMoleculeTitle
c4raaA_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: putative exported protein;PDBTitle: crystal structure of a putative exported protein (bf0058) from2 bacteroides fragilis nctc 9343 at 2.60 a resolution


Added to library: Sat Oct 18 08:27:44 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TIISFKEHTDVNADSILELSFLKLQTKDSCLVKNVGLIRELNNCLLILDSANSNLYVFNKSGAFVNQIGQ
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Known secondary structure (DSSP)

S


S




GGG

S


TTTTTTTTS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KGSGPGEYILLSSFFVDNNKNYIAAIDIAQDKVLYYNATDFSFLYERRLPFSTSCCLQLEDGNLLWNSRE
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Known secondary structure (DSSP) SSSTTS

TTSSTTTTTTT


SSS
S

TTS



 .........150.........160.........170.........180.........190.........200.........210
Sequence YTDSKLSDFYFVVTDSLFDIIDYKXNKEFKSGYTTGPSQXIYKVGTNVFAYTPFDLTIYRVGTSEIVPAH
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Known secondary structure (DSSP)
SSSGGGG
TT



S

S


S
S

TTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SFSFEGTDIPSLDFLNKTSNQGNSNYLYDLIQSDYISYYCVEETERDLFVCYXKNKEKYIGLYDKNTDRT
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Known secondary structure (DSSP) TTB



TTTTS
TSSS
SSTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YNYPIKIFQDQLKVGELNYFSIGSVDDYHVAPLDVLSLKDXAGNGYVFDDKLSELLTISNEEDNSILLFV
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Known secondary structure (DSSP) TT
S





BSTT
TT



TS
TT


 ....
Sequence RIKK
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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