Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4r9fA_

Fold library idPDB HeaderMoleculeTitle
c4r9fA_PDB header: sugar binding proteinChain: A: PDB Molecule: mbp1;PDBTitle: cpmnbp1 with mannobiose bound


Added to library: Sat Nov 1 08:54:19 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KQVVLTLWYPWAGPDGDAVVSLAKEYSKTHPNVQIKAQXVSGAGIAATQGGGQGKFLSAVAAGNPPDLVL
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

S


TT
GGGGTS

SSSS

T


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence YWGQDALPGLADQGAIIPLDDYLKDVDTSKFFEAAYNAXKYKGKIYGLPEXVNVRVLFWNKDLFKQAGLD
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) S
SSST
B


TTS
GGGB
TTTT

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence PNTPPKTIAELDQXAAKLTKTKNGTIEQXGFIPWIGQGVPHVXAGVFGTSLVDSNGNPILSPDKNPQLLN
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TT


SBT
TTBS

TTSTT

TT

SB
TTS
B

STTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLKWEVSYSDKYGAXNINKFIAGXSQNSSQANDPFVLGKVAXXISGEWQINANKQYNPKLNFGVGPIPQA
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)
TTTS
SSS

TTSTTTTT
BSTT
TT




B
 .........290.........300.........310.........320.........330.........340.........350
Sequence PGGKPXPSLXDGNTWXIPKGSKHPQEAXDFIKWTXDPQRIADTADKVYNIAPIVEAAKIQKLNNDPYFKE
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TTS
SS
BTT
S
T
T
B
SB
GGGG
 .........360.........370.........380.........390.........400..
Sequence VLNVAQKGSIYYTPAAKGXLSTETAANNAFQAAQYKKSTPEQALKNAQAEAE
Predicted secondary structure


















SS confidence



















































Known secondary structure (DSSP) S




TTTTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D