PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4r8dB_

Fold library id	PDB Header	Molecule	Title
c4r8dB_	PDB header: transferase	Chain: B: PDB Molecule: histidinol-phosphate aminotransferase;	PDBTitle: crystal structure of rv1600 encoded aminotransferase in complex with2 plp-mes from mycobacterium tuberculosis

Links to external resources
Added to library: Sat Sep 5 09:44:56 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P V T L D D L P L R A D L R G K A P Y G A P Q L A V P V R L N T N E N P H P P T R A L V D D V V R S V R E A A I D L H R Y P D R D A V A L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
G G G T T
S
S
S S
S S
T T T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A D L A G Y L T A Q T G I Q L G V E N I W A A N G S N E I L Q Q L L Q A F G G P G R S A I G F V P S Y S M H P I I S D G T H T E W I E A S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G S
S T T
S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A N D F G L D V D V A V A A V V D R K P D V V F I A S P N N P S G Q S V S L P D L C K L L D V A P G I A I V D E A Y G E F S S Q P S A V S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
S S S
T T T
S S
T T G G G
S S
G G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V E E Y P S K L V V T R T M S K A F A F A G G R L G Y L I A T P A V I D A M L L V R L P Y H L S S V T Q A A A R A A L R H S D D T L S S V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S T T T S S S T T S
G G G
S
T T
S
T T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A L I A E R E R V T T S L N D M G F R V I P S D A N F V L F G E F A D A P A A W R R Y L E A G I L I R D V G I P G Y L R A T T G L A E E N D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
B S S T T
B
S
T T

. . . . . . . . . 360 . . . . .

Sequence A F L R A S A R I A T D L V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	V	T	L	D	D	L	P	L	R	A	D	L	R	G	K	A	P	Y	G	A	P	Q	L	A	V	P	V	R	L	N	T	N	E	N	P	H	P	P	T	R	A	L	V	D	D	V	V	R	S	V	R	E	A	A	I	D	L	H	R	Y	P	D	R	D	A	V	A	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S				G	G	G	T	T				S								S				S	S				S	S																			T	T	T	T	S				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	D	L	A	G	Y	L	T	A	Q	T	G	I	Q	L	G	V	E	N	I	W	A	A	N	G	S	N	E	I	L	Q	Q	L	L	Q	A	F	G	G	P	G	R	S	A	I	G	F	V	P	S	Y	S	M	H	P	I	I	S	D	G	T	H	T	E	W	I	E	A	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S					G	G	G					S															S	T	T								S			T									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	N	D	F	G	L	D	V	D	V	A	V	A	A	V	V	D	R	K	P	D	V	V	F	I	A	S	P	N	N	P	S	G	Q	S	V	S	L	P	D	L	C	K	L	L	D	V	A	P	G	I	A	I	V	D	E	A	Y	G	E	F	S	S	Q	P	S	A	V	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S																S						S	S		T	T	T																	S	S							T	T	G	G	G		S	S			G	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	E	E	Y	P	S	K	L	V	V	T	R	T	M	S	K	A	F	A	F	A	G	G	R	L	G	Y	L	I	A	T	P	A	V	I	D	A	M	L	L	V	R	L	P	Y	H	L	S	S	V	T	Q	A	A	A	R	A	A	L	R	H	S	D	D	T	L	S	S	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S	T	T	T							S	S	S	T	T	S		G	G	G																			S		T	T		S													T	T						T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	L	I	A	E	R	E	R	V	T	T	S	L	N	D	M	G	F	R	V	I	P	S	D	A	N	F	V	L	F	G	E	F	A	D	A	P	A	A	W	R	R	Y	L	E	A	G	I	L	I	R	D	V	G	I	P	G	Y	L	R	A	T	T	G	L	A	E	E	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T							S	S	S							B	S	S											T	T				B			S		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Sequence	A	F	L	R	A	S	A	R	I	A	T	D	L	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	B