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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4r86B_

Fold library idPDB HeaderMoleculeTitle
c4r86B_PDB header: protein transportChain: B: PDB Molecule: rnd family aminoglycoside/multidrug efflux pump;PDBTitle: crystal structure of aminoglycoside/multidrug efflux system acrd from2 salmonella typhimurium


Added to library: Sat Oct 11 08:36:13 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APPNVRITANYPGASAQTLENTVTQVIEQNXTGLDNLXYXSSQSSGTGQATITLSFIAGTDPDEAVQQVQ
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Known secondary structure (DSSP)



TT

TT
S
TT

TTS
TT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NQLQSAXRKLPQAVQDQGVTVRKTGDTNILTIAFVSTDGSXDKQDIADYVASNIQDPLSRVNGVGDIDAY
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Known secondary structure (DSSP) GGGS





SSSSS
TSSSSG
 .........150.........160.........170.........180.........190.........200.........210
Sequence GSQYSXRIWLDPAKLNSFQXTTKDVTDAIESQNAQIAVGQLGGQALNATINAQSLLQTPQQFRDITLRVN
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Known secondary structure (DSSP) GG

TT

TT

S




TT
S

SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence QDGSEVKLGDVATVELGAEKYDYLSRFNGNPASGLGVKLASGANEXATAKLVLDRLNELAQYFPHGLEYK
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Known secondary structure (DSSP) TTS





S
STT
TTS
GGG

TT
 .........290.
Sequence IAYETTSFVKA
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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