PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4r7sA_

Fold library id	PDB Header	Molecule	Title
c4r7sA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: tetratricopeptide repeat protein;	PDBTitle: crystal structure of a tetratricopeptide repeat protein (parmer_03812)2 from parabacteroides merdae atcc 43184 at 2.39 a resolution

Links to external resources
Added to library: Sat Oct 4 08:37:33 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G Q S Y E E L I E K S Y D F V D K G D L V S A E E S L K A A X R K E P A N P L N Y A L L T N L G T I Q R R Q G K L Q E A L I S Y T S A L S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
T T T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H T K N I T I L E N R A S L Y T E L G E T E K A L N D Y N T L L I E N P E H Q E A L Y C R G L L Y I Q L Q N Y X W A E Q D F D K I L E V N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K S V R A R L G H A I L E K X R G N Y D E S E R I F N Y L I S E X P R D W I L Y E G R A D L Y F X X G K N A R A X A D I E K V F T E S E P T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T
S T T
T T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . .

Sequence A N L Y V L R G K I K L A Q Y E K E R A A L D F K K A E S X G Y N K E V I K E L L K L T X N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	Q	S	Y	E	E	L	I	E	K	S	Y	D	F	V	D	K	G	D	L	V	S	A	E	E	S	L	K	A	A	X	R	K	E	P	A	N	P	L	N	Y	A	L	L	T	N	L	G	T	I	Q	R	R	Q	G	K	L	Q	E	A	L	I	S	Y	T	S	A	L	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T																S	T	T		T	T														T	T	T														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	T	K	N	I	T	I	L	E	N	R	A	S	L	Y	T	E	L	G	E	T	E	K	A	L	N	D	Y	N	T	L	L	I	E	N	P	E	H	Q	E	A	L	Y	C	R	G	L	L	Y	I	Q	L	Q	N	Y	X	W	A	E	Q	D	F	D	K	I	L	E	V	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T															T	T																	T	T															T	T																	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	S	V	R	A	R	L	G	H	A	I	L	E	K	X	R	G	N	Y	D	E	S	E	R	I	F	N	Y	L	I	S	E	X	P	R	D	W	I	L	Y	E	G	R	A	D	L	Y	F	X	X	G	K	N	A	R	A	X	A	D	I	E	K	V	F	T	E	S	E	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																T																S	T	T		T													T	T																S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Sequence	A	N	L	Y	V	L	R	G	K	I	K	L	A	Q	Y	E	K	E	R	A	A	L	D	F	K	K	A	E	S	X	G	Y	N	K	E	V	I	K	E	L	L	K	L	T	X	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T														T	T	T												T	T