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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4r7fA_

Fold library idPDB HeaderMoleculeTitle
c4r7fA_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of a hypothetical protein (parmer_01801) from2 parabacteroides merdae atcc 43184 at 2.30 a resolution


Added to library: Sat Dec 20 08:19:13 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVKFFTDVNSKQIKTLQVKVAGELISEPYIALGGEEQIEINFDGLGSGYTRYAYNVVHCNADWTQSQLSP
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Known secondary structure (DSSP)

B

S

TTTT
SS

SSSSS

SS




TTSBB
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence IEYXNGFQGTTIDDFANSIGTTTQYSNYRLLLPNDDVQFKVSGNYAIQVYNEDTPDQIIFTACFSVVEPV
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Known secondary structure (DSSP) S
SS




S
SS
S
SS
SS
TT
TTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence VNISASVSGNTDIDTNQSHQQVSFNINNKNFPITYPQTDLKIFVYQDNRRDNAVTDLQPXSILENQISYT
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Known secondary structure (DSSP) SSB
SS
BSSS
TTS

S
TT
STT
B




STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YNRNLIFPAGNEYRRXEFLSNKYNGXHVENISFHNPYYNVELXTDYRRDKGTYQYDQDQDGRFFIRCSDC
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Known secondary structure (DSSP) S
GGG







SSS

TTTT

B


SSS







TT


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NDPDTEADYYIVHFTLACDPLPDGSVYLNGELFNNVLDEKSKXGYNFETKQYEKAVLLKQGSYNYQYLFV
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Known secondary structure (DSSP) S


S


SSSGGGTT

STTTB
TTTTS
 .........360.........370.........380.........390.......
Sequence PTGSSVGQTGPIEGNYYQTQNEYSIYVYYRPXGARYDRLIGVTTVRN
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Known secondary structure (DSSP) TT



BSTTTT


TT




TT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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